Pairwise Alignments

Query, 267 a.a., ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 274 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  217 bits (552), Expect = 2e-61
 Identities = 115/260 (44%), Positives = 163/260 (62%), Gaps = 10/260 (3%)

Query: 2   SDNTLLTLKNVSRHFGGLKVLQDVNLDIPKGGIFGLIGPNGAGKTTVFNLITGLLPTTSG 61
           S + +L +++V   FGGL  + D++ D+ +G I  LIGPNGAGKTT FN++TG L  T G
Sbjct: 5   SSSAILNVEHVGMKFGGLTAIADLHFDVHEGEILSLIGPNGAGKTTAFNIMTGFLKPTQG 64

Query: 62  TIHFQGQDLAGRKPFQITRGGIARTFQNIRIFKEMSLLENVTVGMDAKLRYGP------- 114
            + F+G+DL+  +P +I R G+ARTFQ   +F + S+ +NV +G+    R+G        
Sbjct: 65  RVLFRGRDLSQTRPNEIARLGLARTFQRTSVFADDSVRDNVLIGLH---RFGDDTRATAL 121

Query: 115 LGLLASTGMFRSEEKRARDRARELLSWVKLDHKANDVADNLSYGDQRKLELARALATEPT 174
           L  L  T   R  E   R+RA  ++  V L  +A D A +LSYG+QR +  A ALA EP 
Sbjct: 122 LDRLFPTPAARRAENAVRERAEAIIDMVGLSARAGDKAGSLSYGEQRLVGFALALAVEPK 181

Query: 175 LLLLDEPVAGMNSTEKSELMVEIENIAARGFTVFMIEHDMRFVMGLCQQIAVLNFGRIIA 234
           +LLLDEPV+GMN++E    +  I  +   G T+ ++EHDM  VM +  +I  LN+GR+IA
Sbjct: 182 MLLLDEPVSGMNASETQGFVRLIRKVRDEGVTILLVEHDMPMVMEVSDRIVCLNYGRLIA 241

Query: 235 RGGPEQIRNDPQVIEAYLGR 254
            G PE IR DP+VIEAYLG+
Sbjct: 242 EGPPEAIRTDPKVIEAYLGK 261