Pairwise Alignments

Query, 248 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Variovorax sp. SCN45

Subject, 236 a.a., putative ABC efflux transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  239 bits (611), Expect = 3e-68
 Identities = 133/222 (59%), Positives = 160/222 (72%), Gaps = 3/222 (1%)

Query: 21  LRFSWPGVKTPCIDIEAFRITAGESVFLHGPSGCGKSTLLSLLAGVLVADEGRVTLLGHD 80
           L F+WPG   P +DI A R+ AGE++FL GPSG GK+TLL LL GV V  +GR+ LLG D
Sbjct: 11  LVFAWPG-HPPLLDIPALRLDAGEALFLKGPSGSGKTTLLGLLGGVNVPVQGRIQLLGQD 69

Query: 81  WSKLSGAQRDRSRVAHVGYIFQQFNLLPYLSVIDNVLLPCRFSARRESQA-ARNGSARQE 139
              LS   RDR RV H GYIFQQFNLLP+LSV +NV LPCRFS  R+++A  R+GS  Q 
Sbjct: 70  LGSLSQGARDRFRVDHTGYIFQQFNLLPFLSVRENVELPCRFSRSRKARAEQRHGSVDQA 129

Query: 140 AEHLLAQMGL-DRNLWKRQALQLSVGQQQRVAAARALIGQPEVVIADEPTSALDEDRREA 198
           A  LL  +GL D  +  R+A  LS+GQQQRVAAARALIGQPE+VIADEPTSALD D REA
Sbjct: 130 ASTLLTHLGLGDPAMLARRADSLSIGQQQRVAAARALIGQPELVIADEPTSALDADTREA 189

Query: 199 FLDVLLTACAQNHSALVFVSHDQRIAQRFVRHVLLPEINRAA 240
           F+ +L   C    ++L+FVSHDQ +A  F RH+ L E+NRAA
Sbjct: 190 FIRLLFDECRAAGASLLFVSHDQSLAPLFDRHLSLAELNRAA 231