Pairwise Alignments

Query, 420 a.a., ABC-type antimicrobial peptide transport system, permease component from Variovorax sp. SCN45

Subject, 413 a.a., Lipoprotein releasing system, permease protein from Pseudomonas putida KT2440

 Score = 51.2 bits (121), Expect = 6e-11
 Identities = 59/297 (19%), Positives = 123/297 (41%), Gaps = 52/297 (17%)

Query: 144 FDAVVGAEVADKLGYHVGQKITLAHGSGELNVAEHADKP---------FTVVGVLARTGT 194
           F  V+G   A +   + G K+TL        V E + +P          TVVG+  + G 
Sbjct: 145 FGVVIGELTARRFRLNTGDKLTLI-------VPEISKEPGGITPRMQRLTVVGIF-KVGA 196

Query: 195 PVDRTVHIGLPAMEAIHLEWVGGAPMPGVHIPAEQVRKFDLTPKNVTAALVGLKNRAAVF 254
            +D +      A  A    W  G  + GV +    +       K + A L         +
Sbjct: 197 ELDGSQAYIHVADAAEMQRWAPGQ-VQGVRLKLHDLYAAPQVSKAIAAGL------GDAY 249

Query: 255 GVQRWISTYTGEPLMAILPGVALDELWSVIGIGENALLLMSALVALVSLAGLVSVVMAGL 314
               W  T                 L+S + + +  + L+  ++  V+   +++ ++  +
Sbjct: 250 RADDWSHTQ--------------GSLFSAMKMEKTMIGLLLMMIIAVAAFNIIATLVMVV 295

Query: 315 NERRRELAVLRAVGAGLRHVLALLALEGAMVTVLGVAFGVVMAVL---GIALLSPWLQAQ 371
           N++  ++A+LR +GA    ++    ++G+++ ++G   G V+ V+    ++ +  WL+  
Sbjct: 296 NDKGPDIAILRTLGATPAQIMGTFMVQGSLIGIVGTLIGGVLGVIAAFNVSQIVGWLERV 355

Query: 372 FGLTLSLSE-------PTLNEW----LLMASLLVAGWLASLLPGIRAYRLSLADGLS 417
            G  +  S+       P+  +W    ++  + LV  +LA++ P  RA ++  A GL+
Sbjct: 356 SGQHIFTSDVYFVSSLPSQLQWGDVAIICTAGLVMSFLATIYPAYRASQVQPAIGLA 412