Pairwise Alignments

Query, 420 a.a., ABC-type antimicrobial peptide transport system, permease component from Variovorax sp. SCN45

Subject, 421 a.a., putative ABC efflux transporter, permease protein from Pseudomonas putida KT2440

 Score =  425 bits (1093), Expect = e-123
 Identities = 220/416 (52%), Positives = 289/416 (69%), Gaps = 2/416 (0%)

Query: 4   LFSIAWRSAWNRRFTLALTVFSIALSTFLLLGVERIRTELRENFASSVSGTDLIVGARTG 63
           L  +A  S  NRRFT  LT F+IALS  LLL VER+RTE R +FAS++SGTDLIVGAR+G
Sbjct: 3   LLRLALASLANRRFTAFLTAFAIALSVCLLLAVERVRTEARASFASTISGTDLIVGARSG 62

Query: 64  STQLLLYSVFRIGAATNNISWKSVQALEAHPGVDWVVPLSLGDSHRGFAVLATSPEYFTR 123
           S  LLLYSVFRIG ATNNI W S Q     P V W +P+SLGDSHRG+ V+ T+ +YF+ 
Sbjct: 63  SVNLLLYSVFRIGNATNNIRWDSFQHYAQDPRVKWAIPISLGDSHRGYRVMGTTTDYFSH 122

Query: 124 FRYGDRQLLKMREGKPFS-ELFDAVVGAEVADKLGYHVGQKITLAHGSGELNVAEHADKP 182
           ++YG RQ L++ +G+ F+ + F+ V+GAEVA+ L Y +G K+ LAHG   +++ +H DKP
Sbjct: 123 YQYGRRQHLQLSQGREFANDPFEVVLGAEVAEALHYKLGDKLVLAHGVAAISLVKHDDKP 182

Query: 183 FTVVGVLARTGTPVDRTVHIGLPAMEAIHLEWVGGAPMPGV-HIPAEQVRKFDLTPKNVT 241
           FTVVGVL RTGTPVDRT+HI L  MEAIH++W  G P  G   I AEQ R  DL P  +T
Sbjct: 183 FTVVGVLKRTGTPVDRTLHISLGGMEAIHIDWHNGVPARGAGRISAEQARTMDLQPAAIT 242

Query: 242 AALVGLKNRAAVFGVQRWISTYTGEPLMAILPGVALDELWSVIGIGENALLLMSALVALV 301
           A ++GL ++ A F +QR I+ Y  EPL+AILPGVAL ELWS++G  E AL ++S  V L 
Sbjct: 243 AFMLGLNSKIATFSLQREINEYRSEPLLAILPGVALQELWSLMGTAEQALFVVSLFVVLT 302

Query: 302 SLAGLVSVVMAGLNERRRELAVLRAVGAGLRHVLALLALEGAMVTVLGVAFGVVMAVLGI 361
            L G+++ ++  LNERRRE+A+LR+VGA   H+  LL LE   +  +G+  G+ +   GI
Sbjct: 303 GLIGMLTAILTSLNERRREMAILRSVGARPWHIAGLLVLEALSLASVGIVAGLGLLYAGI 362

Query: 362 ALLSPWLQAQFGLTLSLSEPTLNEWLLMASLLVAGWLASLLPGIRAYRLSLADGLS 417
           AL   ++QA +GL L L+ P+ +EW L+A +L A  L   +P  RAYR SLADGLS
Sbjct: 363 ALAQGYVQANYGLYLPLALPSTHEWTLLAIILGAALLMGSVPAWRAYRQSLADGLS 418