Pairwise Alignments

Query, 300 a.a., Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 290 a.a., putative Opine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  201 bits (510), Expect = 2e-56
 Identities = 105/258 (40%), Positives = 165/258 (63%), Gaps = 1/258 (0%)

Query: 39  IGALLLIAIAALSIAAPWIATHDPQDIDPLARMQPPSAEHWFGTDALGRDVFSRAVWGGQ 98
           IG  LL+ I  +++ AP IA +DP   +   R++PPSAE W GTD  GRDV SR ++G +
Sbjct: 27  IGIGLLVMIVLVALFAPLIAPYDPLQQNIAYRLEPPSAEFWLGTDTYGRDVLSRLIYGTR 86

Query: 99  VSMIVGATVAVLATFFGIALGLVAGFVRW-ADGPVMRVMDGLMAIPGILLAIALMAVTRA 157
           VS++VG    ++A   G ALG++AG+V    D  +   +D L++ P +LL + + A+  A
Sbjct: 87  VSLLVGFVAVMIAMVVGSALGVIAGYVGGITDRLITGFVDVLLSFPTLLLGLMVAAMLGA 146

Query: 158 SLTTVIIAITVPEIPRVVRLVRSLALTLREQLFVEAAHAVGTRLPTILVRHVLPNIVAPL 217
           SL  +IIAI + EI   VR+ R+  + L+++ FVEA  ++G     ++  H+LPN+++ +
Sbjct: 147 SLENLIIAIAITEIAPFVRIARAPTIALKQRDFVEAGRSLGYGPGRLMTVHILPNMISEV 206

Query: 218 VVQATFVAAAAVLTEAALSFLGVGVPSQTPSWGNMMAEGRNFVTVAFHIILYPGLLLAAT 277
           +V      A A+ TEA+LSF+G+GVP   P+WG+M+ EG   +  A+ + ++P L +  T
Sbjct: 207 LVLGALWMATAIRTEASLSFIGLGVPPPAPTWGSMIREGFENILDAWWLTVFPSLAILLT 266

Query: 278 VLAINLLGDGLRDALDPR 295
           VLA++LLGD LRDA DP+
Sbjct: 267 VLALSLLGDALRDANDPK 284