Pairwise Alignments

Query, 300 a.a., Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) from Variovorax sp. SCN45

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  213 bits (542), Expect = 4e-60
 Identities = 108/268 (40%), Positives = 162/268 (60%), Gaps = 2/268 (0%)

Query: 30  WVRK-HPTLIIGALLLIAIAALSIAAPWIATHDPQDIDPLARMQPPSAEHWFGTDALGRD 88
           W+ K  P  + GA++++ +  + I +PW+ATHDP  ID  AR+ PPSA HWFGTD +GRD
Sbjct: 25  WMLKGSPLTVTGAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRD 84

Query: 89  VFSRAVWGGQVSMIVGATVAVLATFFGIALGLVAGFVRW-ADGPVMRVMDGLMAIPGILL 147
           +FSR + G Q S++ G  V  +A   G  LG ++G +   AD  +MR+MD +++IP ++L
Sbjct: 85  LFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVL 144

Query: 148 AIALMAVTRASLTTVIIAITVPEIPRVVRLVRSLALTLREQLFVEAAHAVGTRLPTILVR 207
            +AL A    SL   ++AI +  IP  VRL R  AL +R+  +V+AA   G     ++  
Sbjct: 145 TMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINW 204

Query: 208 HVLPNIVAPLVVQATFVAAAAVLTEAALSFLGVGVPSQTPSWGNMMAEGRNFVTVAFHII 267
           H+L N + PL+VQA+    +A+L  A L F+G+G    +  WG M+A GRN+V   +   
Sbjct: 205 HILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYC 264

Query: 268 LYPGLLLAATVLAINLLGDGLRDALDPR 295
            +PG  +  T +  NL GDG+RD LDP+
Sbjct: 265 AFPGAAILLTAVGFNLFGDGIRDLLDPK 292