Pairwise Alignments

Query, 327 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

Subject, 321 a.a., ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) from Variovorax sp. SCN45

 Score =  258 bits (660), Expect = 1e-73
 Identities = 135/312 (43%), Positives = 194/312 (62%), Gaps = 5/312 (1%)

Query: 12  RRTFCAAALLAAAACATAQTAYPNKPVRVVVAFTAGGTTDILARAVTQHMSEKLRQPFVI 71
           RR     A +AA A      A+P+KP+R+VV + AGG  D  AR V Q +S  L Q  VI
Sbjct: 5   RRVLKTIAAIAACAPLLGWAAWPDKPIRMVVPYAAGGGADNTARIVAQQLSAALGQQIVI 64

Query: 72  DNKPGGGGNIGTEFVVRAPADGYTLIVNSVGPMAVNQTLYKSLPYDPLADLVPVVQIADV 131
           DN+PG GG IG + V +A ADGYT++ ++    +VN +L K LP+D   D +PV  +A  
Sbjct: 65  DNRPGAGGVIGADNVAKAAADGYTVLYDA-SAFSVNPSLRK-LPFDAAKDFIPVSLVATA 122

Query: 132 PNVLVVNPEVPAKTLEEFIAYAKANPNKLNYGSTGVGTSSHLSSYMLSKRVGADTLHVPY 191
           P +LVV    P KT+ EF+ +A+ NP KL++ S G GT SHL+   L+++   + +HVPY
Sbjct: 123 PQILVVPENAPYKTVAEFLDFARKNPGKLSFASAGGGTGSHLAGEALNEQAKVNLMHVPY 182

Query: 192 KG-ANALNDLLAGRMQFMFATIPSVISHIKAGKLRAIAVSSPKRSRSLPDVPTVAEKGFP 250
           KG A AL DL+ G++   F  + S +S++K+GKLRA+AVSS KR  +LPD PT+ E G P
Sbjct: 183 KGGAPALTDLMGGQVSAYFGNVASTLSYVKSGKLRALAVSSTKRVPALPDTPTLGESGLP 242

Query: 251 DFSAGSWFGFFAPKGTPATVVAQLNKSVNEVL--PSLEAQMIREGADPVGGTPEQFGRFT 308
            ++   W G F PKGTPA +V +L K+V   +  P++  ++++ G +P G TPE F RF 
Sbjct: 243 GYNVVEWNGVFLPKGTPADIVQKLGKAVQAAINDPTVHQKLLQLGLEPAGTTPEAFARFV 302

Query: 309 RQEYEKWKTIVR 320
           + E  +   +VR
Sbjct: 303 QDEIGRVSALVR 314