Pairwise Alignments

Query, 336 a.a., ABC-type Fe3+ transport system, periplasmic component from Variovorax sp. SCN45

Subject, 344 a.a., ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) from Variovorax sp. SCN45

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 86/321 (26%), Positives = 129/321 (40%), Gaps = 26/321 (8%)

Query: 1   MSSRFHRLARLGLLAATLA--AGSAMAQTAICYNCPTEWADWGT--QLKAIKAKTGVTVP 56
           M   F R    GL AA LA  A +A A+  +       +A+      + + + KTG  V 
Sbjct: 1   MKPTFSRCLFSGLAAALLAGAASAAQAEELVVGIFGGSFAEDSKTCHIASFEKKTGAKVA 60

Query: 57  PDNKNSGQSLAQMAAEKASPVADVTYLGVTFAVQAAKDGLVEPY---KPAAWKDIPDGLK 113
               +S Q  A + A       DV Y+  + A Q   + L+E     K A   ++     
Sbjct: 61  LKLGSSSQFAASIRATGGKSDFDVVYIDNSLASQLKNEKLLETIDKSKLANAAEVSPRAL 120

Query: 114 DPAGNWFTIHSGTLGFMVNVDALKGKPVPKSWADLLKPEYKGLIGYLDPASAFVGYVGAV 173
           D  G +    +G    ++  D  + K  P SWADL KPEY G +   D  S   G    +
Sbjct: 121 DKDGQYVVFMTGAT--VIVYDTKQIKTPPTSWADLAKPEYDGRLAIGD-ISGTSGSQFLM 177

Query: 174 AVNEARGGTLDNFKPAIDYFKALQKNEPIVPKQTSYARVLSGEIAILLDYDFNAYRAKYK 233
           A+N  +GGTL N        K + K+   +  Q       + +I  L +    A    Y 
Sbjct: 178 ALNRMKGGTLANMDAGFAAIKPIAKSSVTLYTQ-------ADQIVSLFERQEIAAAVWYP 230

Query: 234 DKAN--------VAFVIPSEGTLAVPYVMSLVAKAPHAADAKKVLDFTLSDEGQAIWA-K 284
           D+A         +A V P EG + +   + +   A   A A K +D  LS EGQ  +A +
Sbjct: 231 DRAGSAIDKGLPLAIVYPKEGAVGILPALVIPKGAKSPALALKYIDEVLSKEGQTCFAER 290

Query: 285 AYLRPVRASAMPKEIEAQFLP 305
            Y  PV       +  A+ +P
Sbjct: 291 KYAGPVNTQVKLSDKAAKIVP 311