Pairwise Alignments

Query, 339 a.a., Transcriptional regulator, LacI family from Variovorax sp. SCN45

Subject, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

 Score =  171 bits (432), Expect = 3e-47
 Identities = 111/315 (35%), Positives = 170/315 (53%), Gaps = 13/315 (4%)

Query: 2   SIQAVAAKAGVSVATVSRAFNFPDKVTPATRELVERVARELNYLPNASARTLRTQRSRVL 61
           +I+ VA +A VSV TVS   N    V+   RE VE   REL Y+PNA AR+L++  +  L
Sbjct: 3   TIKDVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTSTL 62

Query: 62  GIVLPTLLNPTFAECLQGIARAAVAGGYAIIPVTTGYRLDEEERAVHLLLAGNVDGLILV 121
           G+++P   NP FAE ++ +       GY ++   T      +   + +L    +DGLI+V
Sbjct: 63  GMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLIVV 122

Query: 122 VSNPSTS-ATLPRLQAAGVPYVLAYNRHAEHPCVSVDS---EGAVADAVTRLVLLGHRRI 177
           ++      A + +L    VP VL     A+  C  V++   +G +  AV  L+ LGH+RI
Sbjct: 123 LTGTGDDDALVKQLHGLRVPTVLVDREIADPACDLVETAHMQGGLL-AVRHLLSLGHKRI 181

Query: 178 AMVSGTLAASDRAQQRYRGYLKGMADTGL-------DVLPLIEVPFVETAIDALSAQLRV 230
           A + G       ++QR  G+   +A+ G        D L        +   +A+ A LR 
Sbjct: 182 ACIGGQAGVMP-SEQRIEGWRMALAEAGATPDIANGDALLWRGGFTSQGGYEAMHAILRT 240

Query: 231 RQRPTALICSNDLLAIRSIRAAHLSGLSVPDDLSVVGFDGIALGEDLTPALTTIAQPNSD 290
            ++P+A+   NDL+AI ++RAAH SG+ VPDDLS+VGFD I L    +P LTT+AQP   
Sbjct: 241 ERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQPKER 300

Query: 291 IGRQSVELLIQAIAG 305
           IG  +V++L++ + G
Sbjct: 301 IGAMAVDMLLEQMGG 315