Pairwise Alignments

Query, 339 a.a., Transcriptional regulator, LacI family from Variovorax sp. SCN45

Subject, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

 Score =  149 bits (377), Expect = 8e-41
 Identities = 101/321 (31%), Positives = 160/321 (49%), Gaps = 6/321 (1%)

Query: 2   SIQAVAAKAGVSVATVSRAFNFPDKVTPATRELVERVARELNYLPNASARTLRTQRSRVL 61
           +I+ VAA AG+S  TVS   N    V+   R  VE    EL+Y+P+A AR+L+ + +  +
Sbjct: 3   TIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTATI 62

Query: 62  GIVLPTLLNPTFAECLQGIARAAVAGGYAIIPVTTGYRLDEEERAVHLLLAGNVDGLILV 121
           G+++P  +NP FAE  +GI  A    GY +I   +     ++   + +LL   +DGL+ V
Sbjct: 63  GLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV-V 121

Query: 122 VSNPSTSATLPRLQAAGVPYVLAYN--RHAEHPCVSVDSEGAVADAVTRLVLLGHRRIAM 179
            S       L  L +   P V+        +   V +D E     A   L+ LGHR +A 
Sbjct: 122 ASVGQDDDLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDVAY 181

Query: 180 VSGTLAASDRAQQRYRGYLKGMADTGLDV--LPLIEVPFVETAIDALSAQLRVRQRPTAL 237
           + G  A +   Q R  G+ + MA+ G  V    ++   F      A +AQ+   +RP+A+
Sbjct: 182 IGGP-AETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVLEGKRPSAI 240

Query: 238 ICSNDLLAIRSIRAAHLSGLSVPDDLSVVGFDGIALGEDLTPALTTIAQPNSDIGRQSVE 297
              ND++    +RAA    +SVP +LSV+GFD I L   + P+LTT+ Q   ++G  +  
Sbjct: 241 FAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGESAAS 300

Query: 298 LLIQAIAGGTTLQADSSLLLP 318
           LL+  IA      A+  ++ P
Sbjct: 301 LLLTRIATPRQGAAEQRIVAP 321