Pairwise Alignments

Query, 393 a.a., Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.8.8) from Variovorax sp. SCN45

Subject, 386 a.a., acyl-CoA dehydrogenase from Pseudomonas simiae WCS417

 Score =  113 bits (282), Expect = 1e-29
 Identities = 106/411 (25%), Positives = 192/411 (46%), Gaps = 49/411 (11%)

Query: 1   MDLSFTPEEQKFREEVRAWV-KENLPQEISHKVHNALELTRDDLQGWAKILGKK---GWL 56
           M+   + E+    + VR++V KE LP E   +  +  +    +L   A+I  K    G+ 
Sbjct: 1   MNFQLSQEQDMLVDAVRSFVAKELLPHE---EAVDRADAVSPELA--AQIRDKAIAAGFY 55

Query: 57  GYGWPKEFGGPGWTAVQRHLFEEETA-LAGAPRIVPFGPVMVAPVIMAFGNAEQQKRFLP 115
            +  P+E GG G   + + L E E + ++ A  +    P   + ++MA   ++     LP
Sbjct: 56  AFNMPEEVGGGGLDYLSQALIERELSKVSWALHVFVARP---SKILMACTGSQIGDYLLP 112

Query: 116 GIASGEVWWSQGYSEPGSGSDLASVKTKAERKGDKYIVNGQKTWTTLGQYGDWMFNLVRT 175
            +   +V      +EPG+GSD  ++KT+A R GD +++NG K + +   + D+      T
Sbjct: 113 CVQGKKVDCF-ALTEPGAGSDANAIKTRAVRSGDDFVINGSKHFISHAGHADFAIVFAVT 171

Query: 176 ---SNEGKPQTGISFLLLDMKSPGVTVR--PIKLLDGGHEVNEVFFDNVEVPAENLIGEE 230
               + G+ +  ++  L+D  +PG+T+R  P  + + G+   E+FFD+  VPA  ++GE 
Sbjct: 172 DTYEHNGRQRNAVTSFLVDRGTPGMTIRRGPKCVSNRGYHTYEMFFDDCRVPASKVLGEV 231

Query: 231 NKGWTYAKHLLSHERTNIAD--VNRAKRELE-------RLKRIAKSEGVYEDQRFRDEIA 281
            KGW  A   L+  R  +A   V +A+R L+         K+  +  G Y+   F+  +A
Sbjct: 232 GKGWEVANAWLTAGRVMVAANCVGQAQRALDVSLQWAADRKQFGQPIGTYQGVSFK--LA 289

Query: 282 KLEVDIVALEMMVLRVLSAATSGKNSLDVAGLLKIRGSEIQQRYSELMMLAGGAYSLPLI 341
            +   I A E++ L        G  +   AG+ K+  SE   + ++  +   G   L   
Sbjct: 290 DMATQIRAAELLTLHTAWKMDQGSMTDGEAGMAKLFASETLGKVADEAVQIFGGMGL--- 346

Query: 342 REAMEAGWQGNFPGGNPALAPLTSTFFNMRKTTIYGGSNEVQRNIVAQTVL 392
              M+ G             P+   + N R   I+ G++E+QR+I+A+ +L
Sbjct: 347 ---MDEG-------------PVERIWRNARIERIWEGTSEIQRHIIARELL 381