Pairwise Alignments

Query, 393 a.a., Acyl-CoA dehydrogenase, long-chain specific (EC 1.3.8.8) from Variovorax sp. SCN45

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  116 bits (291), Expect = 9e-31
 Identities = 105/397 (26%), Positives = 182/397 (45%), Gaps = 40/397 (10%)

Query: 8   EEQKFREEVRAWVKENLPQ--EISHKVHNALELTRDDLQGWAKILGKKGWLGYGWPKEFG 65
           E+Q+  + VRA+ +E L    E   K H   +   D++        + G  G   P+++G
Sbjct: 6   EQQQIADAVRAFAQERLKPFAEQWDKDHRFPKEAIDEM-------AELGLFGMLVPEQWG 58

Query: 66  GP--GWTAVQRHLFEEETALAGAPRIVPFGPVMVAPVIMAFGNAEQQKRFLPGIASGEVW 123
           G   G+ A    L E          I+     +    I+ FGN +Q+++FL  +A+G + 
Sbjct: 59  GSDTGYVAYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQKEQFLTPLATGAML 118

Query: 124 WSQGYSEPGSGSDLASVKTKAERKGDKYIVNGQKTWTTLGQYGDWMFNLVRTSNEGKPQT 183
            +   +EP +GSD +S+KT+A  +GD Y++NG K + T GQ    +     T  E   + 
Sbjct: 119 GAFALTEPQAGSDASSLKTRARLEGDHYVLNGSKQFITSGQNAGVVIVFAVTDPEA-GKR 177

Query: 184 GISFLLLDMKSPGVTVRPIKLLDGGH--EVNEVFFDNVEVPAENLIGEENKGWTYAKHLL 241
           GIS  ++   SPG  V  ++   G H  +  ++ FDNV+VP  N +G E +G+  A   L
Sbjct: 178 GISAFIVPTDSPGYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLGAEGEGYKIALANL 237

Query: 242 SHERTNIAD----VNRAKRELER---LKRIAKSEGVYEDQRFRDEIAKLEVDIVALEMMV 294
              R  IA     + RA  E+ R    +R +  + + E Q     +A +   I     MV
Sbjct: 238 EGGRIGIASQAVGMARAAFEVARDYANERQSFGKPLIEHQAVAFRLADMATKISVARQMV 297

Query: 295 LRVLSAATSGKNSLDVAGLLKIRGSEIQQRYSELMMLAGGAYSLPLIREAMEAGWQGNFP 354
           L   +   +G+ +L  A + K+  SE+ ++     +   G Y           G+  +F 
Sbjct: 298 LHAAALRDAGRPALVEASMAKLFASEMAEKVCSDALQTLGGY-----------GYLSDF- 345

Query: 355 GGNPALAPLTSTFFNMRKTTIYGGSNEVQRNIVAQTV 391
                  PL   + ++R   IY G++++QR ++A+ +
Sbjct: 346 -------PLERIYRDVRVCQIYEGTSDIQRMVIARNL 375