Pairwise Alignments

Query, 423 a.a., tRNA/rRNA cytosine-C5-methylase from Variovorax sp. SCN45

Subject, 482 a.a., 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF from Dickeya dianthicola ME23

 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 88/322 (27%), Positives = 141/322 (43%), Gaps = 40/322 (12%)

Query: 122 LVAPLKAQLGDGFWPLVESLQQPAPLDLRVNALTDK-----RADVKVELAKAAIKSEVTP 176
           +  P+ A L   F   + ++Q   P  L + A  D      R  ++V   K ++   +  
Sbjct: 1   MAKPIPASLTPDF---LTAMQAIMPAHLSMEAFIDVCQRPLRRSIRVNTLKISVPDFLAL 57

Query: 177 FSPWGLRIEGKPA------LTKLDAFAR----------GAIEVQDEGSQL--LALLLDAK 218
            +P+G  +E  P       L   D  A           G   +Q+  S L   ALL+   
Sbjct: 58  VAPYGWELEAVPWCDEGFWLLNADEEAMRLGNALEHLAGLFYIQEASSMLPVSALLMGDD 117

Query: 219 RGEMVVDFCAGAGGKTLAIGATMRNTGRLYAFDTSAHRLDALKPRLARSKLSNVHPAAIA 278
               V+D  A  G KT  I A + N G + A + SA R+  L   L R  +SN    A+ 
Sbjct: 118 APARVLDMAAAPGSKTTQIAARLNNQGLIVANEYSASRVKVLHANLHRCGVSNT---ALT 174

Query: 279 HERDDRI--KRLAGKIDRVLVDAPCSGLGTLRRNPDLKWRQSAKAVEELTVKQTAILQSA 336
           H  D R+    L    D +L+DAPCSG G +R++P      S +++ ++   Q  ++ SA
Sbjct: 175 HF-DGRVFGNALPETFDAILLDAPCSGEGVVRKDPAAMSHWSLESIADIAATQRELILSA 233

Query: 337 ARLVKSGGRLVYATCSVLPEENEAIAEAFGAANPDFVPVDAAELLQGLKVEGFEALCAGG 396
              +K GG L+Y+TC++  +EN+ +        P    V   E L+ L  +   AL   G
Sbjct: 234 FHALKPGGVLIYSTCTLNHQENQQVCRWLMQQFPAACEV---ESLKDLFPQAHRALTEDG 290

Query: 397 EGGRRYLRLWPHRHATDGFFAA 418
                +L ++P  + ++GFF A
Sbjct: 291 -----FLHVFPQIYDSEGFFVA 307