Pairwise Alignments

Query, 430 a.a., Replication-associated recombination protein RarA from Variovorax sp. SCN45

Subject, 441 a.a., DNA-dependent ATPase required for recombination from Pseudomonas putida KT2440

 Score =  476 bits (1226), Expect = e-139
 Identities = 256/424 (60%), Positives = 306/424 (72%), Gaps = 8/424 (1%)

Query: 7   QPLAERLRPRTLGEVIGQQHLLGPGMSLRIAFESGQPHSCILWGPPGTGKTTIARLMADA 66
           QPLA RLRP +L E +GQ+HLL  G  LR A E G  HS I WGPPG GKTT+ARL+A  
Sbjct: 11  QPLAARLRPSSLDEYVGQEHLLARGKPLREALEQGALHSMIFWGPPGVGKTTLARLLAQF 70

Query: 67  FDAQFLSISAVLGGVKDIREAVDLATAARDGLTQQRTIVFVDEVHRFNKSQQDAFLPHVE 126
            DA F ++SAVL GVK+IR+AV++A   + G   +RTI+FVDEVHRFNKSQQDAFLP+VE
Sbjct: 71  CDAHFETVSAVLAGVKEIRQAVEVAKQ-QAGQYGRRTILFVDEVHRFNKSQQDAFLPYVE 129

Query: 127 SGLFTFIGATTENPSFEVNSALLSRAAVYVLQSLNEDDLKQIVTRAQDIQAVPA-----I 181
            G   FIGATTENPSFE+N+ALLSRA VYVL+SL+E  L+++V RA   +         +
Sbjct: 130 DGTLLFIGATTENPSFELNNALLSRARVYVLKSLDEAALRKLVNRALTEERGLGKRNLRV 189

Query: 182 DTAAVDRLVAYADGDARRLLNTLETLAVAARAEKLSNISDEWLLRVLGERMRRYDKGGEQ 241
              A   L+A ADGD RR+LN LE    +  AE  S I  E L  +LG+  RR+DKGGE 
Sbjct: 190 GDDAFKMLMAAADGDGRRMLNFLEN--ASDLAEDGSEIDVEMLQSLLGDSRRRFDKGGEA 247

Query: 242 FYDTISALHKSVRGSDPDAALYWFVRMLDGGADPRYMARRLVRMASEDIGLADPRALRLA 301
           FYD ISALHKSVRGS+PD ALYWF RMLDGG DP Y+ARR+VRMASEDIG ADPRAL L 
Sbjct: 248 FYDQISALHKSVRGSNPDGALYWFARMLDGGCDPLYIARRVVRMASEDIGNADPRALSLC 307

Query: 302 LDAAEVYERLGTPEGELALAECVVYLAIAPKSNAVYKAYNAVRALVKKDSTRPVPMHLRN 361
           L A +V ERLG+PEGELA+A+ + YLA APKSNAVY  +        +  +  VP+HLRN
Sbjct: 308 LAAWDVQERLGSPEGELAVAQAITYLACAPKSNAVYVGFKTALREAAEHGSLEVPLHLRN 367

Query: 362 APTKLMKELDYGKGYRYAHDEEGGFAAGERYLPDGLEGQVFYEPVDRGLEIRIGEKLREL 421
           APTKLMK+L YG  YRYAHDE   +AAGE Y PD LE + +Y+PV RGLE++IGEKLR L
Sbjct: 368 APTKLMKQLGYGDEYRYAHDEPDAYAAGEDYFPDELEPRQYYQPVPRGLELKIGEKLRHL 427

Query: 422 RRLN 425
             L+
Sbjct: 428 ADLD 431