Pairwise Alignments

Query, 309 a.a., Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 291 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  162 bits (411), Expect = 7e-45
 Identities = 96/305 (31%), Positives = 170/305 (55%), Gaps = 22/305 (7%)

Query: 1   MDILLQQIINGLVLGSMYALIALGYTMVYGIINLINFAHGEVLMVGALTSWTIIGLMKDG 60
           M IL Q I +G+ LG +YA+IA GY + +   + +NF  G  LM+GA+   T++ +    
Sbjct: 1   MQILTQLIFSGIALGMIYAVIAFGYQLTFATSDTLNFGQGNALMLGAMVGLTLVNM---- 56

Query: 61  MPNTPGWLILLIALVIACIVAATLNFVIEKVAYRP-LRNSPKLAPLITAIGMSILLQTLA 119
                 WL+    + + C+  A    V+E++A RP ++   +   +++ I + I+   +A
Sbjct: 57  --GLNYWLM----IPLVCLFGAFQGAVVERIAVRPAIKIKSEFGWIMSTIALGIIFTNVA 110

Query: 120 MIIWKPTNKAYPNLLPTDPIHVAGAVISPTQVMILSVTAFSLVVLMWLVNYTKL-GRAMR 178
             +W   +  +P+ LP  P+H  GA + P +++++ + A  +++ + L N   + G+A+ 
Sbjct: 111 ENVWGRDDLKFPSPLPESPLHFLGANVLPMEILVV-IGALLMMLAVELFNRRSIYGKAVV 169

Query: 179 ATAENPRVAALMGIRPDMVISATFIIGAVLAAIAGVMYASNYGIAQHAMGFLPGLKAFTA 238
           AT  +   A LMGI   +VI+ ++ + ++ AA AGV+ A    +   +MG + GLKAF  
Sbjct: 170 ATFNDRDAAKLMGINTGLVITFSYALSSMTAAFAGVLIAP-LTLTGASMGAVLGLKAFAV 228

Query: 239 AVFGGIGNLAGAVVGGILLGLIEAIGSGYIGTITGGVLGSNYSDIFAFIVLIVMLTLRPS 298
           A+ GG+ +  G VVGGI+LG+ E        T TG  L + Y D+   ++L+++L +RPS
Sbjct: 229 AIIGGLTSGMGIVVGGIILGIAE--------TTTGFYLSTGYKDVPGLVLLLIVLAVRPS 280

Query: 299 GLLGE 303
           GL G+
Sbjct: 281 GLFGK 285