Pairwise Alignments

Query, 309 a.a., Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  152 bits (384), Expect = 9e-42
 Identities = 88/308 (28%), Positives = 165/308 (53%), Gaps = 16/308 (5%)

Query: 1   MDILLQQIINGLVLGSMYALIALGYTMVYGIINLINFAHGEVLMVGALTSWTIIGLMKDG 60
           M    + +I GL+ G MY+L+A+G+ ++Y    + NFA G +++  ALT    + L++ G
Sbjct: 1   MAFFFEVLIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGAMVLFAALT---FVSLLERG 57

Query: 61  MPNTPGWLILLIALVIACIVAATLNFVIEKVAYRPLRNSPKLAPLITAIGMSILLQTLAM 120
           +P    WL  L+ L  A ++A  L  +IE+   RPL     +   +  +G++ +++  A 
Sbjct: 58  VPF---WLSFLVTL--ATMIALAL--LIERAVLRPLVGRSPITLFMATLGLAYIIEGAAQ 110

Query: 121 IIWKPTNKAYPNLLPTDPIHVAGAVISPTQVMILSVTAFSLVVLMWLVNYTKLGRAMRAT 180
            +W          +   P+ + G ++S   +   +  A  +V+L  L N T++G A+RA 
Sbjct: 111 ALWGAQVHGLELAISDAPLELGGLLLSQFDLFAAATAAALVVLLSLLFNRTRIGLALRAV 170

Query: 181 AENPRVAALMGIRPDMVISATFIIGAVLAAIAGVMYASNYGIAQHAMGFLPGLKAFTAAV 240
           A++PR A  +GIR   V +  + +   +  +AG+++ +  G+ Q ++  L  LKA    +
Sbjct: 171 ADDPRAAMSVGIRLPRVWAVVWAVAGFVGLVAGLLWGARLGV-QFSLS-LVVLKALPVLI 228

Query: 241 FGGIGNLAGAVVGGILLGLIEAIGSGYIGTITGGVLGSNYSDIFAFIVLIVMLTLRPSGL 300
            GG  +++GA+VGG+++G  E +   Y G + GG       + F +++ ++ L +RP+GL
Sbjct: 229 IGGFTSISGAIVGGLIIGASEKLAEVYFGPLIGG----GIENWFPYVLALLFLLVRPAGL 284

Query: 301 LGERVADR 308
            GER  +R
Sbjct: 285 FGERAIER 292