Pairwise Alignments

Query, 309 a.a., Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  155 bits (391), Expect = 1e-42
 Identities = 89/308 (28%), Positives = 169/308 (54%), Gaps = 16/308 (5%)

Query: 1   MDILLQQIINGLVLGSMYALIALGYTMVYGIINLINFAHGEVLMVGALTSWTIIGLMKDG 60
           M+  L+ +I GL+ G++Y+L+A+G+ ++Y    + NFA G +L+  AL   T + L + G
Sbjct: 1   MNFFLETLIGGLLAGTLYSLVAIGFVLIYKASGVFNFAQGAMLLFAAL---TFVSLHEQG 57

Query: 61  MPNTPGWLILLIALVIACIVAATLNFVIEKVAYRPLRNSPKLAPLITAIGMSILLQTLAM 120
           +P       L +AL +  ++   L  +IE++  RPL N  ++   +  +G+S +++ LA 
Sbjct: 58  LP-----FALALALTVLVMIVGAL--LIERLVLRPLVNRSQITLFMATLGLSFIIEGLAQ 110

Query: 121 IIWKPTNKAYPNLLPTDPIHVAGAVISPTQVMILSVTAFSLVVLMWLVNYTKLGRAMRAT 180
            +     +A    +   P+ V   +IS   ++   V+A  + VL  L N T++G A+RA 
Sbjct: 111 GLMGAQVRALDLGIEDVPLFVGELMISQFDLVASGVSALLVAVLALLFNKTRIGVALRAV 170

Query: 181 AENPRVAALMGIRPDMVISATFIIGAVLAAIAGVMYASNYGIAQHAMGFLPGLKAFTAAV 240
           A++ R A  +GI  + +    + +  ++  +AG+++ +  G+ Q ++  L  LKA    +
Sbjct: 171 ADDTRAALSLGINLNRIWQIVWAVAGMVGLVAGLLWGARQGV-QFSLS-LVVLKALPVLI 228

Query: 241 FGGIGNLAGAVVGGILLGLIEAIGSGYIGTITGGVLGSNYSDIFAFIVLIVMLTLRPSGL 300
            GG  ++ GA+VGG+++G  E +   YIG + GG      +  FA+ + ++ L +RP+GL
Sbjct: 229 IGGFTSIGGAIVGGLIVGAAENLAEAYIGPLIGG----GITPWFAYFLALIFLYIRPAGL 284

Query: 301 LGERVADR 308
            G+R  +R
Sbjct: 285 FGDRAIER 292