Pairwise Alignments

Query, 402 a.a., Branched-chain amino acid ABC transporter, permease protein LivM (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  241 bits (615), Expect = 3e-68
 Identities = 158/371 (42%), Positives = 213/371 (57%), Gaps = 49/371 (13%)

Query: 5   KNLALYIVGAIAVLALPLLLQMQGNAWVRIADIALLYVLLALGLNIVVGYAGLLDLGYVA 64
           K+   +I+ A+ V+A+   +       + +  + L+YVLL LGLNIVVG AGLLDLGYVA
Sbjct: 92  KSRLRWIIPALIVIAIVFPI-FANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVA 150

Query: 65  FFAVGAYLFALMGSSHLTETFPWFAQMFPNGMHTSLLIVIPLALVVAGCLGVLLGAPTLK 124
           F+A+GAY  AL G  +L   F W               V+PLA + A   G +LG P L+
Sbjct: 151 FYAIGAYGLAL-GYQYLGLGF-W--------------TVLPLAAIAAALAGCILGFPVLR 194

Query: 125 LRGDYLAIVTLGFGEIIRVFLNNLDQPVNITNGPKGITAIDSIKFWGLDLGKAWKFDGF- 183
           + GDYLAIVTLGFGEIIR+ LNN    ++ T GP G+  + S  F GL+ GK  K  G  
Sbjct: 195 MHGDYLAIVTLGFGEIIRLVLNNW---LSFTGGPNGMP-VPSPTFLGLEFGKRAKDGGIP 250

Query: 184 -----------TISSVSLYYYLFLALVVATVIISHRLQTSRIGRAWMAIREDEIAAKAMG 232
                       I  + +Y  LFL +V+A + I HRL    +GRAW A+REDEIA ++MG
Sbjct: 251 FHEFFGIDYNPNIKFLFIYIVLFL-VVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMG 309

Query: 233 INTRNMKLLAFGMGASFGGVSGAMFAAFQGFVSPESFSLMESVMIVAMVVLGGIGHLPGV 292
           +N   +KL AF +GAS  G++G  FA++QGFV+P SF+  ES +I+A+VVLGG+G   GV
Sbjct: 310 LNHVLVKLSAFTIGASTAGLAGVFFASYQGFVNPSSFTFFESALILAIVVLGGMGSTVGV 369

Query: 293 ILGAVLLAALPEVLRYVAGPLQAATDGRLDASILRQLFIALAMIVIMLLRPRGLWPSPEH 352
           ++ A +L   PE+LR                S  R L   + M+V+M+ RPRGL      
Sbjct: 370 VIAAFVLTVAPELLR--------------SFSEYRVLLFGVLMVVMMIWRPRGLIRISRT 415

Query: 353 GKTLARKGGVP 363
           G T  RKG  P
Sbjct: 416 GVT-PRKGVAP 425