Pairwise Alignments

Query, 416 a.a., DNA topoisomerase IB (poxvirus type) (EC 5.99.1.2) from Variovorax sp. SCN45

Subject, 335 a.a., DNA topoisomerase IB (poxvirus type) (EC 5.99.1.2) from Sphingobium sp. HT1-2

 Score =  269 bits (687), Expect = 1e-76
 Identities = 152/359 (42%), Positives = 209/359 (58%), Gaps = 30/359 (8%)

Query: 30  LVYVNPDMPGIRRLRHGERFRYRDAKGRWLRDVDEISRIRMLAIPPAYTQVWICPLPNGH 89
           +++ +  MPGI R    + + YR A G  + D DEI R+  +A+PPAY   W CP P+GH
Sbjct: 6   IIHSHDGMPGISRRVLKQGWAYRAADGSRITDRDEIDRLNAIAMPPAYRDCWFCPSPHGH 65

Query: 90  LQATGIDARGRKQYRYHADWRVMKDETKFERLEAFALALPRIRARVARDLQPEKGQGNGQ 149
           +QATG D RGRKQYRYH D+R  ++  K+    AF  ALP++RAR+  DL         +
Sbjct: 66  IQATGYDERGRKQYRYHPDFRAAREAEKYAGCPAFGRALPQLRARMEEDLS--------R 117

Query: 150 QAPGRGQVLAALVRLLDTTLLRIGNEEYASSNGSYGLTTLRNRHADVHGAALRLRFKGKS 209
           +   + + +AA+VRLLD   LR+GNE YA++N S+G TTLR RH D++G +L LR++ KS
Sbjct: 118 RGLRKARTIAAVVRLLDLAKLRVGNEHYATTNKSFGATTLRRRHVDLNGRSLTLRYRAKS 177

Query: 210 GVMHEARLDDPRVAKVVRQCQQLPGQALFQYAGEDGELHSVSSTDVNDYLAEAAPGERFT 269
           G   +  + D R+ + VR  Q LPGQ LFQY  EDGE H +SS+DVN Y+A+A  G+ FT
Sbjct: 178 GKEQQLSITDSRLLRFVRAVQDLPGQHLFQYLDEDGEAHPISSSDVNAYIAQAMGGD-FT 236

Query: 270 AKDFRTWHGTVQALELTRLACEPGRTAADGTRYSAKDILAAVAKQLGNTPAVCKKAYVHP 329
           AK FRTW  +  A E                  S K+++  VA  LGNTPA+ +K+Y+HP
Sbjct: 237 AKHFRTWGASTIAFE-----------TLAARHVSLKEMIEPVAAALGNTPAISRKSYIHP 285

Query: 330 AVLALGSALSDDDEDAATALFEKIAGRKTARPSRGLYAAERRLLAFLRTHRQGQARAAA 388
           A++     L  D +D      E   G +  R +R L   ER L+AFL         AAA
Sbjct: 286 ALI----DLCKDGQD------EWRQGLRLPRRTRYLSRHERGLIAFLDDLANAPPLAAA 334