Pairwise Alignments

Query, 311 a.a., LysR family transcriptional regulator STM3121 from Variovorax sp. SCN45

Subject, 290 a.a., HTH-type transcriptional regulator from Pseudomonas putida KT2440

 Score =  143 bits (361), Expect = 4e-39
 Identities = 103/300 (34%), Positives = 153/300 (51%), Gaps = 11/300 (3%)

Query: 1   MDIRALRYFVAVAGTGHMTRAAEQLGIQQPPLSLQIKALERELGMPLFRRHPRGVALTDA 60
           M++R LRYF  +A T + TRAAE L I QPPLS QI  LE +LG  L  R  R + LT+A
Sbjct: 1   MELRHLRYFKVLAETLNFTRAAELLHIAQPPLSRQISQLEDQLGTLLVVRE-RPLRLTEA 59

Query: 61  GRLFQAEALRMLQDMESMKQRMARVAKGQADTLAVGFTSSAAAHRFMPEALRAFRRAYPL 120
           GR F  +   +LQ ++++     R+ +GQ   L +GF  S   +  +PE +R  R+   L
Sbjct: 60  GRFFYEQTCTVLQQLQNISDNTRRIGQGQRQWLGIGFAPSTL-YTVLPELIRELRQDSEL 118

Query: 121 VELQLREDNAAELTDALAAGRLHCGLLRVPVARPEGLVFETMLREPVLVAMPSDHRFALA 180
            EL L E    +  +AL +GR+  G  R+ +  P  +  + +  +P++  +P  H  A  
Sbjct: 119 -ELGLNEMTTLQQVEALKSGRIDIGFGRIRIDDPV-IHQQVLCEDPLVAVLPKGHPLA-- 174

Query: 181 RTKASRPLPLARLCEEGIILVRRPGAPGLYAELLALCHAKGLRPRVVAEVDRMMTNLNLV 240
                 PL LA+L  E  IL      P     +LAL    G+  RV    + + T + LV
Sbjct: 175 ----GSPLSLAQLAGEAFILYPANPRPSYADHVLALFAHHGMSIRVSQWANELQTAIGLV 230

Query: 241 AAGVGLSVVPASMTGVHAHAIAYTRLADGGQLDAPLTLVSRAEEDNLPAQHFAALLRKLA 300
           A GVG+++VPAS+   H   I Y  L D G + +P+ L  R  + +   Q   AL+ + A
Sbjct: 231 AVGVGVTLVPASVQQQHRPDIEYVGLLDSGAV-SPIILSRRKGDVSPIVQRCLALIEQQA 289