Pairwise Alignments

Query, 494 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 468 a.a., Outer membrane protein OprJ from Pseudomonas putida KT2440

 Score =  356 bits (914), Expect = e-103
 Identities = 197/459 (42%), Positives = 282/459 (61%), Gaps = 6/459 (1%)

Query: 14  LLAAALLAGCANLAPVYSRPDAPVPSQWPATSGAKTEGAVSATTGWQGFITDDRLRRTIA 73
           ++ A  LAGC+ L P Y RP+APV ++W   +G    G       WQ FI D  LR+ + 
Sbjct: 11  IVLALTLAGCS-LTPTYQRPEAPVAAEWGDAAGHT--GHSVEQLDWQAFIVDPVLRQLVG 67

Query: 74  LALANNRDLRVAVQNIEKARAQYGVQRAELFPSVSATAGGTRQRTSAATSNSGESSIGSQ 133
            AL NNR LR  + +IE+ARAQY +QRA+  P ++A+A G RQ   AA S+ G   + S 
Sbjct: 68  TALDNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNRQHLPAALSSDGREGVSST 127

Query: 134 YSASLGFSSYELDLFGRVRNLNEAALQSYLSTEATRRSTQISLVAEVASAWLTLAADNER 193
           Y   L    YE+DLFGRV++L++AAL+ YL+TE   R+ +I+L+AEV+ A+L L     R
Sbjct: 128 YQVGLSLPEYEVDLFGRVKSLSDAALEQYLATEEVGRAARIALIAEVSQAYLALDGAERR 187

Query: 194 LKLAQDTLASQQRSYELTGRMRELGASSALALAQAQTTVESARVDVAGYTAQVAQDRNAL 253
             L + TLAS++ S  L G+ R  G ++AL   +A   VE +R ++     Q  Q  NAL
Sbjct: 188 QALTRQTLASREDSLALVGQRRAAGTATALDHQEALGLVEQSRAELEVTVRQQRQAYNAL 247

Query: 254 DLLAGATVPDELLPATGIAGMATASALVEVPAGLPSALLQQRPDVRAAEHTLQGSNADIG 313
            LL G+    + +PA           L ++  G PSAL+++RPD+ AAEH L+  NADIG
Sbjct: 248 VLLLGSAEAAKAMPAER---PDEPMVLNDIVPGAPSALIERRPDILAAEHRLRARNADIG 304

Query: 314 AARAAFFPTISLTASAGSSSTALSGLFKGGNSTWSFAPSISLPIFNAGSNRASLDAAKAQ 373
           AARAAFFP ISLT S G++S  +SGLF GG+ +W+F P +SLP+F+AG NRA L  A+A+
Sbjct: 305 AARAAFFPRISLTGSFGTASAQMSGLFDGGSRSWAFMPQLSLPLFDAGRNRAGLSLAEAR 364

Query: 374 REIDLATYEKTVQTAFREVADALAVRRSLGEQLAAQQSLVEATRKSYTLSEALYRNGSYS 433
           ++  +A YE  +Q AFREVADALA   +L  + AA+++L + +R++ TL++A Y  G  +
Sbjct: 365 KDSAVAAYEGAIQVAFREVADALAATDTLRREQAARRALADTSRETLTLAKARYEGGVDN 424

Query: 434 FLEVLDAQRSLYTAQQTLIGLRLSEQSNRITLYKVMGGG 472
            L  LDAQR+ Y  +   I      Q   + L++ +GGG
Sbjct: 425 HLRYLDAQRNSYVNEAAFIEASTQRQLALVNLFRALGGG 463