Pairwise Alignments

Query, 1045 a.a., RND efflux system, inner membrane transporter from Variovorax sp. SCN45

Subject, 1037 a.a., The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family from Enterobacter asburiae PDN3

 Score = 1204 bits (3115), Expect = 0.0
 Identities = 613/1039 (58%), Positives = 783/1039 (75%), Gaps = 9/1039 (0%)

Query: 1    MARFFIDRPIFAWVIAIVIMLAGALSIGTLPLEQYPDIAPTKVSINATYTGASAKTIEDS 60
            MA FFIDRPIFAWV+AI++ L G L+I +LP+EQYPD+AP  V + A Y GASA+T+E++
Sbjct: 1    MANFFIDRPIFAWVLAILLCLTGVLAITSLPVEQYPDLAPPNVRVTANYPGASAQTLENT 60

Query: 61   VTQVIEQKMKGLDRLVSMSSSSTSSGTARIELTFEAGTNADVAQMQVQNKLQQAQSQLPQ 120
            VTQVIEQ M GLD L+ MSS S+++G A + L+F+AGT+ D A  QVQN+LQ A  +LPQ
Sbjct: 61   VTQVIEQNMTGLDNLMYMSSQSSATGQATVTLSFKAGTDPDEAVQQVQNQLQSAMRKLPQ 120

Query: 121  SVQSQGVTVTKSGTDFLMIVSLISQDGSATATDIGDYISSSLLDVISRIDGVGDVQTLGS 180
            +VQ+QGVTV K+G   ++ ++ +S DGS    DI DY++S++ D ISRI+GVGD+   GS
Sbjct: 121  AVQNQGVTVRKTGDTNILTIAFVSTDGSMDKQDIADYVASNIQDPISRINGVGDIDAYGS 180

Query: 181  GYAMRIWLDPAKLQKYSLMPSDVSSALTSQNTEVSAGQLGALPATAGQRLTATITARSKL 240
             Y+MRIWLDP KL    +  +DV++A+ +QN +++ GQLG  P+   Q L ATI ++S L
Sbjct: 181  QYSMRIWLDPNKLNSVQMTATDVTNAIKAQNAQIAVGQLGGTPSVDKQALNATINSQSLL 240

Query: 241  RTADQFREVIVKSDSSSGAIVRLGDVARIELGSESYTINSHFDGHPSAGMGVKLATGANA 300
            +T DQFR + ++ +   G+ VRLGDVA +E+G+E Y   S F+G+ ++G+G+KLA+GAN 
Sbjct: 241  QTPDQFRNITLRVNQD-GSEVRLGDVATVEMGAEKYDYLSRFNGNQASGLGIKLASGANE 299

Query: 301  LTVSNAVKAKLAELSPFFPNQMKAVVGYDTTPFVRISIEEVAKTLAEAMVLVVLIMYLFL 360
            +  +  V  +L ELS +FP+ ++  V Y+TT FV+ SIE+V KTL EA+ LV L+MYLFL
Sbjct: 300  MATAKLVLDRLDELSQYFPHGLEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFL 359

Query: 361  QNLRATLVPAIAVPVVLLGTFGVLSLLGYSINTLTMFGMVLAIGLLVDDAIVVVENVERL 420
            QN RATL+P IAVPVVLLGTF VL   GYSINTLTMF MVLAIGLLVDDAIVVVENVER+
Sbjct: 360  QNFRATLIPTIAVPVVLLGTFAVLYAFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERI 419

Query: 421  MTEEGLSPKEATRKSMSEITGALVGIALVLSAVFIPMAFFGGSTGVIYRQFSVTIVAAML 480
            M+EEGLSP++ATRKSM +I GALVGIA+VLSAVFIPMAFFGG+TG IYRQFS+TIV+AM+
Sbjct: 420  MSEEGLSPRQATRKSMGQIQGALVGIAMVLSAVFIPMAFFGGTTGAIYRQFSITIVSAMV 479

Query: 481  LSVLVALTLSPALCATLLKPVQAGHHEEKRGFFGWFNRTFERNAERYRSGVGGLLHRGKR 540
            LSVLVAL L+PALCAT+LKP+  G    ++GFFGWFNR F RNA RY S VGG+LHR  R
Sbjct: 480  LSVLVALILTPALCATILKPLHKGEQHGQKGFFGWFNRMFNRNAARYESAVGGVLHRSLR 539

Query: 541  SLLVYALLVGVLGMTFMRLPTSFLPDEDQGTLMAQVKLPASATDEQLQQTMKSFEQYLSS 600
             +++Y +L+G +   FM LPTSFLP ED+G     V+LP+ AT +Q  + ++  EQY  +
Sbjct: 540  WMMIYVVLLGGMVWLFMHLPTSFLPMEDRGMFTTSVQLPSGATQQQTLKVVQKVEQYFFT 599

Query: 601  QKEVSHYITLTGLSGDQATGNA------FITLKDWRERGGKAQDAASLARRFTMDMATRA 654
             KE  + +++    G    GN       F+ LKDW ER  K   + ++  R T   A   
Sbjct: 600  -KEKDNVVSVFSTVGSGPGGNGQNVARMFVRLKDWDERDTKTGTSFAIIERATKAFA-HI 657

Query: 655  SNANVFVMLPPAVRGLGSNAGFDVQLQDLGGIGHEALVQAREQFLALARKDPALSQVRSN 714
              A VF   PPA+ GLGS+AGFD++LQD  G GH AL+ AR++ LALA  DP L++VR N
Sbjct: 658  KEARVFASSPPAISGLGSSAGFDMELQDHAGAGHTALMAARDKLLALAGNDPGLTRVRHN 717

Query: 715  NLDDTPQFSIDIDDRKAAALNLSTSDINDTLSSAMGGSYVNDFINNGRVKKVYVQADAPF 774
             LDD+PQ  +DID RKA AL +S +DINDTL +A G SYVNDF++ GRVKKVYVQ+ APF
Sbjct: 718  GLDDSPQLQVDIDQRKAQALGVSINDINDTLQTAWGSSYVNDFMDRGRVKKVYVQSAAPF 777

Query: 775  RMQPDSVDRWHVRNANSEMVPFSAFASSRWTYGSPQLSRYNGMSSFELIGDPAAGVSSGT 834
            RM PD ++RW VRN    MVPFSAFA+S W  GSP+L RYNG S+ E++G+ A GVS+GT
Sbjct: 778  RMLPDDINRWFVRNNAGGMVPFSAFATSHWESGSPRLERYNGYSAVEIVGEAAPGVSTGT 837

Query: 835  AMDAVERIMKQLPQGIGYEWAGSSYQERLSGSQAPLLYAVSILFVFLCLAALYESWSVPF 894
            AMD +E++++QLP G G EW   SYQERLSG+QAP LYA+S+L VFLCLAALYESWSVPF
Sbjct: 838  AMDTMEKLVQQLPAGFGLEWTAMSYQERLSGAQAPALYALSLLVVFLCLAALYESWSVPF 897

Query: 895  SVMLVVPLGVLGAVLATKLAGLSNDVYFQVGLLATVGLSAKNAILIVEFAKQLQDEGMAL 954
            SVMLVVPLGV+GA+LAT + GL NDVYFQVGLL  +GLSAKNAILIVEFA ++  +G  L
Sbjct: 898  SVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNAKGHEL 957

Query: 955  VEATLQAVRLRLRPILMTSLAFMFGVLPLALSTGAGSGSRRAIGVGVLGGIATATVLGIF 1014
            + ATL A R RLRPILMTSLAF+FGVLP+A STGAGS S+ A+G GV+GG+ +ATVL I+
Sbjct: 958  MAATLHACRQRLRPILMTSLAFVFGVLPMATSTGAGSSSQHAVGTGVMGGMISATVLAIY 1017

Query: 1015 FVPLFFVAIRRFFAQRKKA 1033
            FVPLFFV +RR F  +++A
Sbjct: 1018 FVPLFFVLVRRRFPLKERA 1036