Pairwise Alignments

Query, 295 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 305 a.a., transcriptional activator of gcdH, LysR family from Pseudomonas putida KT2440

 Score =  115 bits (287), Expect = 2e-30
 Identities = 87/294 (29%), Positives = 135/294 (45%), Gaps = 18/294 (6%)

Query: 5   RLPSTQGLQAFEAVARLRSVNLAAEELSVTPSAVSHRIRQLELLLELKFFTGG--DFSLS 62
           ++PST  L  FEA AR  S   AA+EL++T  AV  +I  LE  L ++ F        L+
Sbjct: 4   KIPSTAALICFEAAARNESFTKAAQELALTQGAVCRQIGGLEAFLNVELFRRSRRGVRLT 63

Query: 63  ADGMAYLARVREAIAALQQVPGREPASQVRR-----LRLAVTPTFSRQMLLPRLARFRDT 117
             G++Y  +V   + A++    R+  S +R+     + LAV PTF  Q LLPRL  F+  
Sbjct: 64  EAGLSYSRQVAAQLDAVE----RDTLSVMRQQGANVIELAVVPTFGTQWLLPRLKDFQQR 119

Query: 118 YPNIELMLQVTAPMRNATPEEADLELRFGTGPFHDREFCQLLADEVSPACSPAYLQRHGP 177
           +P + + L              D  + FG   +   +  QL+ +   P CSPA L   G 
Sbjct: 120 HPEVTVNLTNRTRPFLFADTTFDAAIYFGDADWSGTQSHQLMGENPVPVCSPALLNGQGM 179

Query: 178 FEGGFATDAEVSRAQLLR--TPLESWRTWFKACGVGLPEPATGHQFTDLGLALDAAAEDF 235
            E        +++  LL+  T   +WR WF + G+ +    TG ++    +   AA  D 
Sbjct: 180 LEA-----RHIAQLPLLQQSTRPYAWRQWFGSVGMNVERDMTGPRYELFSMLAQAAMHDM 234

Query: 236 GVVLMHLKLGSAWLDNGRLVRLSPRSVPSPNAYFLCWRPGTMERWECATFVEWL 289
           G+ L+   L    L+ GRLV  +  ++ S  AY+L      +E      F +WL
Sbjct: 235 GIALIPPFLIQRELEEGRLVVANRHALSSDKAYYLMIPERKVESASLRAFRDWL 288