Pairwise Alignments

Query, 336 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 318 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 60.1 bits (144), Expect = 7e-14
 Identities = 71/310 (22%), Positives = 119/310 (38%), Gaps = 15/310 (4%)

Query: 30  PQRQLEAWRERVGHVIDVVPSSAGIGKPFQAAIDRYEVGD--IVFTDCRSDAMLLERSLA 87
           P+RQ+  W E +      +      G+PF   + R+      +  +  RS  +   RS A
Sbjct: 13  PERQVR-WAEAISDTYFPLSLEFAAGQPFDGHLQRWSTPSTPLSLSRLRSSQLGYSRSKA 71

Query: 88  RISTDNVRNFAFHVFAEGDVDSVTVRSSAQRDAPAAAKLVALDMGQPVRMH---RNACRV 144
            I  D+    AF++        V       + + +    +      P R H   +N   V
Sbjct: 72  HIGQDHE---AFYLVTVPHGSEVHFEQDGHQISCSPGGFIVERGDAPYRFHYGTQNDLWV 128

Query: 145 LSFFVPGTMLQEVFPDPAAVHARTMQPDSPIARLALDHAAALGREIATLSAPAAEGAVRD 204
           L   +P   L+                   + R+ ++      R   T    A    +  
Sbjct: 129 LK--LPERALKANLLGHKRYTRHCFDARQGLGRIFVEQLDLCARHFDTSPPAARHLLLEQ 186

Query: 205 AVQLLVASFGKQARLSGGARAAARAAMFGQVRRYVQANLHRADLSPENVLAALHLPRPTL 264
           A   L+ +  +  R+ G   +        +V +YVQ NL   +LSP+ +  A  L    L
Sbjct: 187 ASATLLLALQQDERVLGSEGSNLSTLHLTRVEQYVQQNLGDPELSPQTIAGACGLSLRYL 246

Query: 265 YRLFQHEG-GLGAYIRHLRLRHAADDLVRYPH--LMVTDVAYGVGFKSPSDFTRAFRRAY 321
           ++LF      L  ++R  RL  A    +R PH  L + ++A+  GF   + FTRAFR+ Y
Sbjct: 247 HKLFAITPYTLNEWVRLQRLE-AVHRQLRDPHCHLAIGELAFRWGFADQAQFTRAFRQQY 305

Query: 322 SMSPQEFRAS 331
             +  E RA+
Sbjct: 306 GCTASEVRAT 315