Pairwise Alignments

Query, 214 a.a., ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA from Variovorax sp. SCN45

Subject, 925 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score = 63.2 bits (152), Expect = 2e-14
 Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 10/172 (5%)

Query: 43  GDTGAGKSALLQVIAGVLPAGGGRLTVAGTRLDASPEAYRRQVFFVDPTTDRFDQLTARE 102
           G  G GKS  ++++ G+L A  G   + G ++DAS  A R +V ++      + +LT R+
Sbjct: 315 GSNGCGKSTTMKMLTGLLAASEGEAKLFGHKVDASDMAIRHRVGYMSQAFSLYSELTVRQ 374

Query: 103 ----CTRQLTEGDTGFDPAAWQALADGFSLEPHLDKKLFMLSTGSRRKVWMAAGLASGRP 158
                 R     +    P   + +A+ F L   +D     L  G R+++ +A  +     
Sbjct: 375 NLDLHARLFKLPEATIQPRIAE-MAERFDLGTVMDTLPDDLPLGIRQRLSLAVAMIHSPD 433

Query: 159 LVLLDEPTAGLDAGSTRCLWQALTGVAAQERRAVLVAS-----AARIDTVPL 205
           +++LDEPT+G+D  +    WQ L  ++  +   + +++     A R D + L
Sbjct: 434 ILILDEPTSGVDPVARDGFWQILADLSRNDNVTIFISTHFMNEAERCDRISL 485



 Score = 55.1 bits (131), Expect = 4e-12
 Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 14/203 (6%)

Query: 6   PFPPILQLQDIGFAYPGQSAIASGWTASIGPGVTLLHGDTGAGKSALLQVIAGVLPAGGG 65
           P  P+ +L D+  A+    A+A          +  L G  G GKS+LL +I+G      G
Sbjct: 13  PGAPVARLTDVRLAFGSTVALADISVEIPAGRMIGLIGPDGVGKSSLLSLISGARAIQKG 72

Query: 66  RLTV-AGT------RLDASPE-AYRRQVFFVD--PTTDRFDQLTARECTRQLTEGDTGFD 115
            + V AG       R D  P  AY  Q    +  PT   F+ +   +   +L   D    
Sbjct: 73  NVEVLAGDMSDPRHREDTCPRIAYMPQGLGKNLYPTLSVFENI---DFFGRLFGQDGRER 129

Query: 116 PAAWQALADGFSLEPHLDKKLFMLSTGSRRKVWMAAGLASGRPLVLLDEPTAGLDAGSTR 175
            A    L     LE   D+    LS G ++K+ +   L     L++LDEPT G+D  S R
Sbjct: 130 KARIAELLKSTGLERFADRPAMKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLSRR 189

Query: 176 CLWQALTGV-AAQERRAVLVASA 197
             W+ +  + A +   +V+VA+A
Sbjct: 190 QFWELIDSIRAGRPGMSVIVATA 212