Pairwise Alignments

Query, 909 a.a., T6SS AAA+ chaperone ClpV (TssH) from Variovorax sp. SCN45

Subject, 940 a.a., putative Chaperone-associated ATPase from Pseudomonas putida KT2440

 Score =  297 bits (760), Expect = 2e-84
 Identities = 188/490 (38%), Positives = 276/490 (56%), Gaps = 40/490 (8%)

Query: 15  SLAYKAIEGATVFCKMRGNPYVELEHWFAQLLQAQDSDLHR-VIQHYGLDVSVIAKDMTA 73
           +L  +A + AT F    G   V+ EH    LL   DSD+ + ++  + + V  + + + A
Sbjct: 135 ALLQEAAKRATEF----GRSEVDTEHL---LLALADSDVVKTILSQFKIKVDELKRQIEA 187

Query: 74  ALDRLPRGATAISDFSPHIENAIERAWTYATLQFGEAQVRTGYILVGMLKTQSLRNPLFG 133
              R  +        SP +++A+ RA+  A+ + G A V   + L+G+ +          
Sbjct: 188 EAKRGDKPFEGEVGVSPRVKDALSRAFV-ASNELGHAYVGPEHFLIGLAE---------- 236

Query: 134 LSKQFEKVKVEDLADNFAKICDASPEAQMRAQDGTGMGSGAPGEDAGAMAPAAMGKGDAL 193
                   + E LA N  +     P+A +R      +G GA  ED  A AP    +   L
Sbjct: 237 --------EGEGLAANLLRRYGLMPQA-LRQCVSKVVGKGA--EDGRAEAPTETPE---L 282

Query: 194 KKFAVDLTEKAKKGEMDPVTGRDEEIRQIVDILMRRRQNNPLLTGEAGVGKTAVVEGFAQ 253
            K++ DLT  A+ G++DPV GR +EI   +++L RR++NNP+L GE GVGKTA+VEG AQ
Sbjct: 283 DKYSRDLTRMARDGKLDPVIGRAQEIETTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQ 342

Query: 254 RLARGDVPPQLKDVKLLTLDIGLLQAGASMKGEFEQRLRQVIDEVQSSPTPIILFIDEIH 313
           R+  G+VP  L+D +L+ L+I  L AGA  +GEFE+R+++V+ E+      +ILFIDE+H
Sbjct: 343 RMVAGEVPETLRDKRLVELNINSLVAGAKYRGEFEERVQKVLKEIAEHQGELILFIDEVH 402

Query: 314 TLVGAGGAAGTG--DAANLLKPALARGNLRTIGATTWAEYKKYIEKDPALTRRFQVVQVP 371
           T+VGAG   G G  D AN+ KP +ARG L  IGATT  EY+KYIE+D AL RRFQ V VP
Sbjct: 403 TIVGAGQGGGEGGLDVANVFKPMMARGELNLIGATTLNEYQKYIEQDAALERRFQPVVVP 462

Query: 372 EPDEQKAILMLRGVASVLEKHHRVQLLDEAIEAAVKLSHRYIPARQLPDKAVSLLDTACA 431
           EP   + I++LRG+    E HH+V + +EAI AA +LS RY+ AR LPDKA+ LLD A A
Sbjct: 463 EPTVAQTIMILRGLRDTFEAHHKVSITEEAIIAAAELSDRYVSARFLPDKAIDLLDQAAA 522

Query: 432 RVAVSQHATPPEVEDCMRRIEGLTVEQEIIGREEAIGIDVTKRAAQVAALLAESKVQLDA 491
           RV +S  A P  V++    +  L  EQ+     +         AAQ++  +  ++ +L  
Sbjct: 523 RVKLSATARPVAVQEMESELHQLRREQDYAASRKQY-----DNAAQISKRVEATEAELKQ 577

Query: 492 LNARWQEEKG 501
               W+ E+G
Sbjct: 578 RVEEWERERG 587



 Score =  238 bits (606), Expect = 2e-66
 Identities = 158/470 (33%), Positives = 248/470 (52%), Gaps = 23/470 (4%)

Query: 449 RRIEGLTVEQEIIGREEAI--GIDVTKRAAQVAALLAESKVQLDALNARWQEEKGLVDRL 506
           RR + + V +  + +   I  G+  T  A    ++  E+ +    L+ R+   + L D+ 
Sbjct: 454 RRFQPVVVPEPTVAQTIMILRGLRDTFEAHHKVSITEEAIIAAAELSDRYVSARFLPDKA 513

Query: 507 LEL------RAKLRAGNKPVDSVKADGDAKADVPPPQPSPSGGGSEDRAALLAEL----- 555
           ++L      R KL A  +PV   + + +    +   Q   +     D AA +++      
Sbjct: 514 IDLLDQAAARVKLSATARPVAVQEMESELH-QLRREQDYAASRKQYDNAAQISKRVEATE 572

Query: 556 HELQAKIHAVQGESPLILPSVDEQAVASVVADWTGIPVGRMVKNEVEAVLKLADTLNQRV 615
            EL+ ++   + E       V  + VA +V+  TGIPV  +   E E +L L   L++R+
Sbjct: 573 AELKQRVEEWERERGSGSTEVKAEHVAQIVSRLTGIPVNELTVEEREKLLHLEQRLHERL 632

Query: 616 IGQKHGLEMIARRIQTSRARLDNPQKPIGVFMLCGTSGVGKTETALALAEALYGGEQNII 675
           +GQ   +  +A  ++ SRA L    KP+  F+  G++GVGKTE A ALAE +YG E  ++
Sbjct: 633 VGQDEAVRAVADAVRLSRAGLREGSKPVATFLFLGSTGVGKTELAKALAETIYGDESALL 692

Query: 676 TINMSEFQEAHTVSTLKGAPPGYVGYGEGGILTEAVRRRPYSVVLLDEVEKAHPDVHEIF 735
            I+MSE+ E H+V+ L GAPPGYVGY EGG LTE VRR+PYSV+LLDE+EKAH DV+ I 
Sbjct: 693 RIDMSEYGERHSVARLVGAPPGYVGYDEGGQLTEKVRRKPYSVLLLDEIEKAHADVYNIL 752

Query: 736 FQVFDKGWMEDGEGRMIDFKNTIILLTTNAGSELVMSMCRDPELLPDSNALADALKAPLM 795
            QVFD G + DG+GR++DF NTII+ T+N GS+++    + P    +     +  K  +M
Sbjct: 753 LQVFDDGRLTDGKGRVVDFTNTIIIATSNLGSDIIQRRLKAPGAAGEE---YEKTKVEVM 809

Query: 796 KV----FPPALLGRI-VTIPYYPLSPDMMKKIVRLQLGRIKKRVEANHGVPFDYSDAVVD 850
           +V    F P  L RI   I ++ L    ++ IV LQL R+ +   A+ GV   + + +VD
Sbjct: 810 EVLRGHFRPEFLNRIDEIIVFHALGKQEIRHIVGLQLERVARNA-ASQGVTLTFDETLVD 868

Query: 851 QVVARCQDPESGGRVIDAILTNTVLPTISVEYLQRLASGGEIRRVALDVK 900
            +      PE G R +  ++ + +   ++ E L      G+   V  D K
Sbjct: 869 HLAQVGYKPEFGARELKRLIRSELETALAREMLGGGIGKGDHAHVRWDDK 918