Pairwise Alignments

Query, 791 a.a., VgrG protein from Variovorax sp. SCN45

Subject, 658 a.a., type IV secretion protein Rhs from Pseudomonas simiae WCS417

 Score =  207 bits (526), Expect = 2e-57
 Identities = 189/672 (28%), Positives = 293/672 (43%), Gaps = 93/672 (13%)

Query: 25  GHEALARPSAYELTVLSKNKAIDAKDILGRAFDVVIEFKDADGGTHERHCQGHAVRFVRA 84
           G E++++P  +++ ++S+   +D + +L R   V + F D   G H     G   R  + 
Sbjct: 28  GIESISQPYRFDIELVSEQPDLDLESLLHR--QVYLGFDDRGRGVH-----GLVYRMAQG 80

Query: 85  GHVGRHYEYRITLRSWFWLLTKRTNSRILQEKKVLEVLDAVFEDSPIKRFKKTRADNVIG 144
               R   Y++TL      L   ++ RI Q K V +++  V E   I+R +      + G
Sbjct: 81  DSGRRLTRYQMTLVPQLAYLGHSSHQRIFQHKTVPQIVAQVLEGQGIQRDRFEF--RLSG 138

Query: 145 THNPRRYCVQHQESDYGFLSRLLEDEGIYYWFDAHGAPGTMHLSDASDIAHEKLPANDTL 204
           T+  R YCVQ  E+D  F+ RL  + GI+Y F  H + G  HL    D     + A+   
Sbjct: 139 TYPEREYCVQFGETDLAFIQRLCAELGIHYHFQ-HSSAG--HLLVFGDDQTVFVQADPPT 195

Query: 205 HHMATDASEARFNEVSRWVSGRQFGTGKHASRDSDFKAIKKKLGADADASGEHELASLEM 264
            +       A    + R+    Q  T     RD DF+  K  L  +++ +GE +L  LE 
Sbjct: 196 PYTPGSGMVADTPVIKRFAVQVQARTTGVNLRDYDFR--KPSLALESEVTGE-QLPPLEA 252

Query: 265 FEFPGGYFTGDEGESRAKLRGDELRARRDRHWALTPW--PDVAAGRGFKFEGDPDGTRNG 322
             +PG +     G+  A+ RG E R R D   A      P + +GR  K  G P    N 
Sbjct: 253 QVYPGHFNDRAHGKYLAQ-RGLE-RHRSDYRVARGSGDEPALGSGRFLKLAGHPREDWND 310

Query: 323 EYIIAACTFVASHRGYEGVSASAASAARPVQAALAEVLRDDAVNADTLQVLEDLIAATPA 382
            +++       +H  +EG+                             QVLE+ +     
Sbjct: 311 LWLV-------THVTHEGLQP---------------------------QVLEESVTEVAG 336

Query: 383 LAAGQPGTSAFLLTVMPADRPFRAPR-LTPRVTMPGPQTAIVVGPKGDELHVDDHGRVKV 441
               Q   + F  T  P D  FR P    PR T+ G Q A+V GP   E+H D++GRVKV
Sbjct: 337 GDFRQGYRNEFSAT--PWDAIFRPPMPEQPRPTIAGYQNAVVTGPADSEIHCDEYGRVKV 394

Query: 442 HFHWDRYDESDEKSTCWVRVSQPWAGKGWGGYFAPRIGQEVIVDFLNGDPDRPIIMGRVY 501
              WDR  E ++ S+CW+RV+  WA   +G    PR+G EV+V F+NGD D P++MG + 
Sbjct: 395 QLVWDRDGEHNDHSSCWLRVASGWAHDRYGSVLIPRVGMEVLVGFVNGDMDMPLVMGCLP 454

Query: 502 NDDQPIPF---KSHTQSGFRTRSTPKGNAANFNEFRFEDDKGKEQVYLHAERNLDVEVEA 558
           N    +P       T+S FR++S+P G    +NE R ED KG E++YL A+R        
Sbjct: 455 NAATQVPLDLPADKTRSVFRSQSSPGG--GGYNELRIEDRKGAEEIYLRAQR-------- 504

Query: 559 DETRNVGHDRTKTVGHDEKVKIKNDRTEEVTGNETITIHGKRELTVDKDQYVTIKTNHSE 618
                   D T+ V HD +V +  +   E+ G E    HG R   + +D ++ +      
Sbjct: 505 --------DWTQHVLHDLRVNVDGESHHELQGEELRITHGNRLTDLKQDDHLMV------ 550

Query: 619 EVTGWKSTWVTGNHRLSTSANHDQTVQGNETIDV-SGTRSDTV-VGAVTQKVGPFTQTVT 676
                 S  V     +   A     ++G  T+ + +G +S T+  G +   V        
Sbjct: 551 ----GGSRQVRAGQTIQIGAGQSVVIEGGATVTIQAGGQSITLCAGGIFSSV----PIQL 602

Query: 677 GAMTVTAAGPIT 688
           G+     A P+T
Sbjct: 603 GSAPAATAAPLT 614