Pairwise Alignments

Query, 791 a.a., VgrG protein from Variovorax sp. SCN45

Subject, 771 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

 Score =  213 bits (541), Expect = 4e-59
 Identities = 175/593 (29%), Positives = 261/593 (44%), Gaps = 75/593 (12%)

Query: 27  EALARPSAYELTVLSKNKAIDAKDILGRAFDVVIEFKDADGGTHERHCQGHAVRFVRAGH 86
           E L +P    L ++S    ID     G   D    F         RH  G    F +   
Sbjct: 28  ETLNQPFVLNLELVSYESDID----FGHVLDKPALFTLYSADRPLRHVHGLVSAFSQGET 83

Query: 87  VGRHYEYRITLRSWFWLLTKRTNSRILQEKKVLEVLDAVFEDSPIKRFKKTRADNVIGTH 146
                 Y   +         R+N RI Q+K V ++L+ +F+   I RF+   +      H
Sbjct: 84  GFCRTRYHAVVEPQLARARLRSNWRIFQQKTVPQILELMFKRQGITRFELKSS----AQH 139

Query: 147 NPRRYCVQHQESDYGFLSRLLEDEGIYYWFDAHGAPGTMHLSD--------------ASD 192
             R +CVQ  E+D  F+ RL  +EG  Y F+      T+ ++D              A D
Sbjct: 140 QVREFCVQAGETDLDFIHRLAAEEGFVYRFEHCARQHTLIVTDRLLSFGLLSRGALKAED 199

Query: 193 -----IAHEKLPANDTLHHMATDASEARFNEVSRWVSGRQFGTGKHASRDSDFKAIKKKL 247
                +  + +  +  L+H ++   +AR   + R     Q  T +   RD  F     + 
Sbjct: 200 DEALWLDEDDVGPDKVLYHASSGGDQARAC-LRRLRYCEQVRTARQVQRDYTFTNPAYRQ 258

Query: 248 GADADASG-EHELASLEMFEFPGGYFTGDEGESRAKLRGDELRARRDRHWALTPWPDVAA 306
              A  SG  H+    E F++PG Y     G+   + R   LR   D   A     DV  
Sbjct: 259 EHKAQTSGVTHQSLDYERFDYPGRYKRDAVGKPFTETRLTALR--HDACLAEVQGDDVRL 316

Query: 307 GRGFKFE--GDPDGTRNGEY-IIAACTFVASHRGYEGVSASAASAARPVQAALAEVLRDD 363
             G  F   G P    N  + +I+ C        +EG   ++              L+++
Sbjct: 317 QTGLSFTLVGHPREDLNVHWRVISLC--------HEGTQLTS--------------LQEE 354

Query: 364 AVNADTLQVLEDLIAATPALAAGQPGTSAFLLTVMPADRPFRAPRLTPRVTMPGPQTAIV 423
           A  A+                  +    A L+  M   RP  AP   PR+   GP  A V
Sbjct: 355 AAGAEQ---------------GTRYVNDALLVQGMAEWRP--APMAKPRID--GPHMATV 395

Query: 424 VGPKGDELHVDDHGRVKVHFHWDRYDESDEKSTCWVRVSQPWAGKGWGGYFAPRIGQEVI 483
           VGP G+E++ D+ GRVKV F WDR  +++E S+CWV VSQ WAG  WG    PRIGQ+VI
Sbjct: 396 VGPPGEEIYCDEWGRVKVSFPWDRESKNNEFSSCWVWVSQGWAGGSWGSMAIPRIGQDVI 455

Query: 484 VDFLNGDPDRPIIMGRVYNDDQPIPFKSHTQSGFRTRSTPKGNAANFNEFRFEDDKGKEQ 543
           V ++NGDPD+P+I GR Y  DQ  P+         T  +       FNE RFED+ G+++
Sbjct: 456 VQYVNGDPDQPMITGRTYCGDQLPPYDLPDHKTRMTIKSQTHKGDGFNELRFEDELGRQE 515

Query: 544 VYLHAERNLDVEVEADETRNVGHDRTKTVGHDEKVKIKNDRTEEVTGNETITI 596
           V++HAER+ +  V+ +ET  +G+DR++ V HDE V I  +R+ +V  ++  T+
Sbjct: 516 VFIHAERDQNNVVKHNETTLIGNDRSERVEHDEVVDIGGNRSVKVGASKRETV 568