Pairwise Alignments

Query, 791 a.a., VgrG protein from Variovorax sp. SCN45

Subject, 725 a.a., type 6 secretion system protein from Pseudomonas putida KT2440

 Score =  246 bits (627), Expect = 4e-69
 Identities = 196/705 (27%), Positives = 299/705 (42%), Gaps = 80/705 (11%)

Query: 27  EALARPSAYELTVLSKNKAIDAKDILGRAFDVVIEFKDADGGTHERHCQGHAVRFVRAGH 86
           EA++ P   +L ++S    +D   +L    D  + F    G    R+  G    F +   
Sbjct: 29  EAISSPFRLQLELVSFEDDVDFAQLL----DKPVLFTLWQGERPLRYVHGLVSTFSQGET 84

Query: 87  VGRHYEYRITLRSWFWLLTKRTNSRILQEKKVLEVLDAVFEDSPIKRFKKTRADNVIGTH 146
                 YR  +         R+N RI Q+K V ++L+ + +   +  ++    D     H
Sbjct: 85  GFDRTRYRALVEPVLARAGLRSNWRIFQQKTVPQILEIMLKRQGVNAYELKCLD----PH 140

Query: 147 NPRRYCVQHQESDYGFLSRLLEDEGIYYWFD-----------------AHGAPGTMHLSD 189
             R +CVQ  E+D  F++RL  +EGI Y FD                    + G +   D
Sbjct: 141 QVREFCVQAGETDLDFMARLAAEEGIVYRFDHTPKQHLLIITDRLLALGQISRGAIKTDD 200

Query: 190 ASDIAHEKLPANDTLHHMATDASEARFNEVSRWVSGRQFGTGKHASRDSDFKAIKKKLGA 249
             +  H      D + + +    +     + R     Q  T +   RD  F   + +   
Sbjct: 201 EDEGFHNDDVGPDQVLYRSVGGGDQARPCLRRLRYSEQVRTARQVQRDYTFTHPQYRQEH 260

Query: 250 DA-DASGEHELASLEMFEFPGGYFTGDEGESRAKLRGDELRARRDRHWALTPWPDVAAGR 308
            A D S  H+  + E F++PG Y     G      R   LR   D   A     DV    
Sbjct: 261 QAYDNSNTHQSLNYERFDYPGRYKRDAVGVPFTATRLTALR--HDARIAEVEGDDVRLQP 318

Query: 309 GFKFE--GDPDGTRNGEYIIAACTFVASHRGYEGVSASAASAARPVQAALAEVLRDDAVN 366
           G  F     P    N  +     T    H G +  S                 L+++A +
Sbjct: 319 GLSFTLIEHPREDLNVHWR----TVSVHHEGTQFTS-----------------LQEEAAD 357

Query: 367 ADTLQVLEDLIAATPALAAGQPGTSAFLLTVMPADRPFRAPRLTPRVTMPGPQTAIVVGP 426
           +                   Q GT      ++   R    P   P+  + GP  A VVGP
Sbjct: 358 S-------------------QQGTRYKQEALLVPGRTEWRPAPLPKPRIDGPHMATVVGP 398

Query: 427 KGDELHVDDHGRVKVHFHWDRYDESDEKSTCWVRVSQPWAGKGWGGYFAPRIGQEVIVDF 486
           KG+E++ D  GRVKV F WDR  E++E S+CWVRVSQ WAG  WG    PRIGQ+VI+ +
Sbjct: 399 KGEEIYCDQWGRVKVSFPWDRESENNEFSSCWVRVSQGWAGGSWGSMAIPRIGQDVIIQY 458

Query: 487 LNGDPDRPIIMGRVYNDDQPIPFKSHTQSGFRTRSTPKGNAANFNEFRFEDDKGKEQVYL 546
           +N DPD+P+I GR Y  +Q  P+         T  +       FNE RFED+ G+++V++
Sbjct: 459 VNADPDQPMITGRTYCGNQLPPYDLPEHKTRMTIKSQTHKGEGFNELRFEDELGRQEVFI 518

Query: 547 HAERNLDVEVEADETRNVGHDRTKTVGHDEKVKIKNDRTEEVTGNETITIHGKRELTVDK 606
           HAER+ +  V+ DET  VG+DRT+ V  DE + I  DR E++  +E++ I   R   +  
Sbjct: 519 HAERDQNNIVKHDETTRVGNDRTERVERDETISIGQDRREDIARDESVGIGQNRVHEIGN 578

Query: 607 DQYVTIKTNHSEEVTGWKSTWVTGNHRLSTSANHDQTV-QGNETIDVSGTRSDTVVGAVT 665
           D  ++I  NH   +T       TG  R+    NH Q + + N T+++ G R   V G  T
Sbjct: 579 DDSLSIGRNH--RIT-------TGKDRIEQVGNHRQDITKANHTVEIGGHREQVVAGHST 629

Query: 666 QKVGPFTQTVTGAMTVTAAGPITFNAPAGFTVVAPGGTKIIDMSL 710
            + G   +  T    +  +  +T  +PAG   V   G  +  ++L
Sbjct: 630 LQTGEAIRHTTKVYDIQVSESLTIRSPAGLLRVDGAGITLDGLAL 674