Pairwise Alignments

Query, 792 a.a., VgrG protein from Variovorax sp. SCN45

Subject, 618 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  283 bits (724), Expect = 2e-80
 Identities = 196/635 (30%), Positives = 299/635 (47%), Gaps = 64/635 (10%)

Query: 15  NGELMFWRIAGHEALARASSYELTVLSKSRTLDARDILGRAFDVSIEFEDADGARHVRHC 74
           N E +    +G E L++   ++L +LS+   +  + ++G    V IE  +       RH 
Sbjct: 27  NDEFLLEHFSGTEELSKLYEFDLALLSQQSDVKLKSLIGSQATVEIELSNGS----FRHI 82

Query: 75  QGHAVRFMRAGHVGRYFEYRIALRSWFWLLTKRINSRILQDKKVLEVLDAVFEDSPIKRF 134
            G+  RF   G  G Y  Y   L  W W+LT R ++RI Q+K V  V+  VF        
Sbjct: 83  NGYVQRFSTQGSDGGYVRYAAVLGPWLWMLTCRFDTRIFQEKSVQAVVSEVFAGFGTLAK 142

Query: 135 KKTRADNVIGTHEPRRYCVQHQESDYQFLSRLLEDEGIYYWFDAHDAPGTMHLSDASDLA 194
            + R    + +H    Y  Q++ESD+ F+ RLLE EG++Y+F+       M ++D S   
Sbjct: 143 YEFRVSKPLKSHS---YITQYRESDFNFVQRLLESEGLFYYFEHTADSHLMVITDDSSTL 199

Query: 195 HDKLPAASTLNFMPAGATEPRDNEISRWISERQFDTGKYASRDSNFKSIKKKLEATGGEP 254
              LP    + +  A  TE  D+ I++W S RQ  +G+ A R  +++  +  L  T    
Sbjct: 200 LP-LPEQPQIRYHSASVTETADS-ITQWQSTRQLQSGQIAVRTFDYRQPRNFLPVTMQSL 257

Query: 255 DKC-ELSEFEAFEFAGGYFSGGDADDKGKLRG--EEIGARRQRHFALTRWPDVAAGRSFT 311
           ++  ++  FE ++F G Y  G   D +  +R   E +    +  +  +    +  G +F 
Sbjct: 258 NQQGDVDRFEIYDFPGQYTHGSYEDGEAIVRNRIEALELMGKTFYGESNCRAMKPGYTFE 317

Query: 312 ----FKGDPDAARDGDYVIAACTFVASHSGYEGVPEVGDPVPLDVLLREALEDDAVCADT 367
               +  D  AA +  +++ +     S++   G                   D A   + 
Sbjct: 318 LTQHYLHDTGAAENRKFLLLSVEHRGSNNYMTG-------------------DQAGYVNR 358

Query: 368 LPVLRELVAQTPALRAGRNGDSAFLLTVMPIDVPFRPPRLTPRVRMPGPQSAIVVGPDGE 427
              +R+ +A                         +RP   T +  + GPQ+AIVVGP GE
Sbjct: 359 FVCVRKKIA-------------------------YRPQLNTRKPLINGPQTAIVVGPPGE 393

Query: 428 EIHADDFGRVKVHFHWDRYDKSNEKSTCWVRVSQPWAGKGWGGYFIPRIGQEVIVDFLNG 487
           EI  D+ GRVK+ FHWDR  + N++S+CWVRV+Q  A  G+G   IPR+G EV+V FL+G
Sbjct: 394 EIFTDELGRVKLQFHWDRQGQFNDQSSCWVRVAQSGASGGFGSIQIPRVGDEVVVVFLDG 453

Query: 488 DPDRPLVIGRVYNDDQPIPF---GSHTQSGFRTRSTPKGSAANCNEFRFEDKKGSEQVYL 544
           +PDRPL++G +YN     P+    + TQSGF TRS  KG     N FRFEDK G+EQ+ +
Sbjct: 454 NPDRPLIMGSLYNSTNTPPWSLPANKTQSGFLTRSM-KGDGGTANFFRFEDKAGAEQIIM 512

Query: 545 HAEKNQDIEVENDETHWVGHDRKKTVDHDETVHVKHDRTETVGNNEKITIGVNRTESVGN 604
           HAE+N D E+E DETH VG++R  TV    T  VK D    V          N+   V  
Sbjct: 513 HAERNMDTEIELDETHDVGNNRSITVGGTHTETVKKDTVVQVTEGSYTLQVDNQFIQVAA 572

Query: 605 NETISIGVNRTETVGSNETITIGSNRTITVGASET 639
            + I + V  +    + E I I     +T     T
Sbjct: 573 KQHIILQVGDSSITLTPEGIEIKGKVIVTTSTDTT 607



 Score = 33.5 bits (75), Expect = 4e-05
 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 19/84 (22%)

Query: 701 NLTTNVGSDEARSVGKGRSTSVGKDDSLSVGKNLV------------------ISAGDSI 742
           N+ T +  DE   VG  RS +VG   + +V K+ V                  ++A   I
Sbjct: 517 NMDTEIELDETHDVGNNRSITVGGTHTETVKKDTVVQVTEGSYTLQVDNQFIQVAAKQHI 576

Query: 743 SITTGSASITMKKDGTIVIKGKDI 766
            +  G +SIT+  +G I IKGK I
Sbjct: 577 ILQVGDSSITLTPEG-IEIKGKVI 599



 Score = 28.5 bits (62), Expect = 0.001
 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 4/57 (7%)

Query: 642 VALQRTHTVGVNETITVGAAQEITV--GAVQAVTVGASQTISVGANQSSSIGANRSV 696
           + L  TH VG N +ITVG     TV    V  VT G S T+ V  NQ   + A + +
Sbjct: 522 IELDETHDVGNNRSITVGGTHTETVKKDTVVQVTEG-SYTLQVD-NQFIQVAAKQHI 576