Pairwise Alignments

Query, 497 a.a., T6SS component TssC (ImpC/VipB) from Variovorax sp. SCN45

Subject, 493 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  468 bits (1205), Expect = e-136
 Identities = 238/492 (48%), Positives = 330/492 (67%), Gaps = 10/492 (2%)

Query: 7   QSALKDVAYAGS-DFSSLLQKEFKPRSDEAKSAVEAAVLTLAQQALSNSTVIGKDVTKSI 65
           +S LK  A A + +   LL K             +  + TL  QAL  +    +++T ++
Sbjct: 4   ESLLKSEAQATTAENQGLLSKVVSATRQTEPDRAQNLLRTLTDQALKGTVKYDRNLTVTL 63

Query: 66  QAMIAAIDAKLTDQVNRIIHHPDYQKLESAWRGLHYMVNNTETDEHLKIRVMDISKQELA 125
              IA +D  +++Q+  I+  P++ KLE  WRGL+Y+V N+ET  +LKIRVM+  K+ELA
Sbjct: 64  NHAIAELDRTISEQLAAIMQAPEFAKLEGTWRGLNYLVKNSETSVNLKIRVMNAGKRELA 123

Query: 126 KNLKKFKGAAWDQSPMFKKIYEQEYGQFGGEPFGALVGDYHFDQSPPDVELLGEMAKIAA 185
           ++L+K     +DQS +FK IYE E+G  GGEP GA++GDY F  S  DV+LL  ++ IAA
Sbjct: 124 RDLEK--AVEFDQSRLFKAIYEDEFGTPGGEPLGAIIGDYEFGNSFDDVQLLQGVSSIAA 181

Query: 186 SAHAPFITGASPNLMQMESWQELANPRDLTKIFLTPEYAGWRSLRESDDAKYLGLCMPRF 245
           +A APFI+ ASP++   E +++LA PRDL KIF T EYA WRS RESDD++++ L +PR 
Sbjct: 182 AAFAPFISAASPHMFGFEDYRDLARPRDLEKIFDTVEYAKWRSFRESDDSRFVTLALPRV 241

Query: 246 LARTPYGANTNPVEEFDFEEDTAGA-----DHGKYAWANAAYAMATNINRSYKLYGWGSR 300
           LAR PYG  TNPV++F ++E T GA      H +Y W NAAY M T +  ++   GW + 
Sbjct: 242 LARMPYGPKTNPVDDFAYDE-TRGAVNGDLQHDEYCWMNAAYVMGTKLTEAFAKSGWCTA 300

Query: 301 IRGIESGGAVENLPLHTFPSDDGGVDQKCPTEIAISDRREAELSKAGLLSLIHRKNSDFA 360
           IRG E+GG VENLP+H F SDDG +D KCPTE+ I+DRR+AEL K G L L H KN+D+A
Sbjct: 301 IRGAENGGRVENLPMHVFSSDDGDLDLKCPTEVGITDRRDAELGKLGFLPLCHYKNTDYA 360

Query: 361 AFIGAQSLHKPAEYDDPDATANANLAARLPYLFACNRFAHYLKCIVRDKVGSFKEREEMQ 420
            F GAQ+ HKP  YD P+ATANA ++ARLPY+ A +RFAHYLK + RDK+GSF E  + +
Sbjct: 361 VFFGAQTAHKPKLYDKPEATANAAVSARLPYIMATSRFAHYLKVMGRDKIGSFMEASDCE 420

Query: 421 RWLNKWIMNYVDGDPVNSSETTKAQKPLAAAEVVVEEVEGNPGYYTSKFFLRPHYQLEGL 480
            WLN+WI NYV+ +   + E ++A+ PL  A+V V+EV G PG Y +  ++RP  Q+E L
Sbjct: 421 VWLNRWIANYVNAND-EAGEESRAKYPLRDAKVTVQEVPGKPGAYNAVAWMRPWLQMEEL 479

Query: 481 TVSLRLVSKLPS 492
           T SLR+V+++PS
Sbjct: 480 TTSLRMVARIPS 491