Pairwise Alignments

Query, 346 a.a., T6SS component TssA (ImpA) from Variovorax sp. SCN45

Subject, 339 a.a., type VI secretion protein ImpA from Pseudomonas simiae WCS417

 Score =  210 bits (535), Expect = 4e-59
 Identities = 126/339 (37%), Positives = 189/339 (55%), Gaps = 16/339 (4%)

Query: 10  LLTPIGEASPCGDDLEYDADFTALVAAAQGKPEQQFGDTVIPAVEPEWREVAEQSDAILR 69
           LLT +   SPCG+D+EYDA F  L   A+G+PE+  GD ++PA  PEWR + +QS  +L 
Sbjct: 6   LLTAVSATSPCGEDMEYDAQFLQLERDAKGQPERSMGDAILPAEPPEWRSIQQQSLDLLA 65

Query: 70  RSKDVRAAVLLLRAATRMQGVTGFAAGLRLLGDLLDGFWDGIHPKLDADDDNDPTMRLNA 129
           RSKD+R    LL++A  +QGV G A  L L+  LL  +W  +HP+LDADDDNDPT+R+NA
Sbjct: 66  RSKDLRITHFLLQSALALQGVAGLAEALTLIDALLRDYWADLHPRLDADDDNDPTVRINA 125

Query: 130 LAPLTDEGMGLRDLYDAQVGMARGIGPIRVRDIAIAHNALTAVG---GEATYSMAQVQGG 186
           L  LT +   +R L ++ +  +R  GP+ +R    A   L       G    + A +   
Sbjct: 126 LTGLTCD-TNIRLLRESILTRSRTFGPVTLRAALNASGLLNFPDEQLGAQQLNAAFLDSD 184

Query: 187 LEAIQAERPEAIQAAVEVPALIERLHRLIVDRTGRADAVDFDA----LRGIGRVLHKACA 242
            E +QA R     A +   A  E + + + D+ G A  VD  A    L+   ++L++A  
Sbjct: 185 PEQLQATR----DALIAARAACEAIEQQVNDQVGSAQGVDLSALKQPLKQALQILNQAVP 240

Query: 243 AASGAPADAAEAASDDADAGTQDASASGTRPAAARGEIQNRQDAVQMLDRVIRYLEQAEP 302
             +G  +   EA SDD +A + D +A+   P  A G+I +R D ++ LD+++ Y  + EP
Sbjct: 241 GTAG--SSEPEAVSDD-NAPSVDVAAAPAAPRPA-GDIASRDDVLRSLDKILAYYTRHEP 296

Query: 303 GNPAPLLIERAKKLIGVSFLEIMANLAPNAMDTIETVTG 341
            +P P+L+ RAK L+   F  I+ NL P+ M   E + G
Sbjct: 297 SSPLPVLLNRAKNLVHADFAAIVRNLIPDGMSQFENLRG 335