Pairwise Alignments

Query, 346 a.a., T6SS component TssA (ImpA) from Variovorax sp. SCN45

Subject, 361 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 99/365 (27%), Positives = 153/365 (41%), Gaps = 29/365 (7%)

Query: 1   MLNNELASALLTPIGEASPCGDDLEYDADFTALVAAAQGKPEQQF-GDTVIPAVEPEWRE 59
           +LN+   + L+ PI   S  G+DL + A F  +  A +  P+    GD        +W +
Sbjct: 4   ILNDLSLATLVAPIEGGS--GEDLSFSALFDQIKEARRADPDYLTQGDWQTDLKTADWEQ 61

Query: 60  VAEQS-DAILRRSKDVRAAVLLLRAATRMQGVTGFAAGLRLLGDLLDGFWDGIHPKLDAD 118
           V   S   + ++SKD+     L     + +   G   GL L   LL  FW+ ++P L+ D
Sbjct: 62  VINLSAQGLAQQSKDLMLVAWLCEGLAQREHFEGITFGLELTEQLLVAFWETLYPTLE-D 120

Query: 119 DDNDPTMRLNAL-APLTDEGMGLRDLYDAQVGMARGIGPIRVRDIAIAHNAL--TAVG-G 174
             ++   RL+ L   LTD   GL  +     G+ R      V ++A+ +     TA+  G
Sbjct: 121 GLDERAARLSWLKTTLTDIAGGLPIIQGQNFGVLRYDESRHVENLALQNPKAMQTALNEG 180

Query: 175 EATYSMAQVQGGLEAIQAERPEAIQAAVEVPA---LIERLHRL----------IVDRTGR 221
           +    + Q    L      R +A Q A  + A   L     RL          + D   R
Sbjct: 181 KINAEIFQRSVALTDTDYLRAKAQQIATSLNACKRLQASADRLFGHEAPSFASLADMLSR 240

Query: 222 ADAVDFDALRGIGRVLHKACAAASGAPADAAEAASDDADAGT-QDASASGTRPAAARGEI 280
           A  +    L+  G  LH A    +   A AA       +AG   +A+   T PAA R   
Sbjct: 241 ASQLAEKLLKDRGVELHPAIPEEAQPQAMAANLH----EAGEPMNATPPTTAPAALRTTP 296

Query: 281 QNRQDAVQMLDRVIRYLEQAEPGNPAPLLIERAKKLIGVSFLEIMANLAP--NAMDTIET 338
             R +A  ML  + +Y +Q+EP +P P LIERA K   +     ++++    N +D I  
Sbjct: 297 LTRDEAFTMLAGIAQYFKQSEPQSPVPYLIERAIKWGNMPLEGWLSDVIKDNNVVDNIRD 356

Query: 339 VTGRR 343
           V G R
Sbjct: 357 VLGTR 361