Pairwise Alignments

Query, 170 a.a., T6SS secretion lipoprotein TssJ (VasD) from Variovorax sp. SCN45

Subject, 149 a.a., type VI secretion protein from Pseudomonas simiae WCS417

 Score =  109 bits (272), Expect = 2e-29
 Identities = 56/138 (40%), Positives = 85/138 (61%), Gaps = 3/138 (2%)

Query: 35  LIGCASKPVVTTVA---VSLTAGPDANPDARGRASPLTVRVYALKSPGPFEGADFFSLFE 91
           L GC+S    +T+    ++L AG + NPD  GR SP+ V++  L+ P  FE ADFFSL+E
Sbjct: 4   LAGCSSLSPFSTLTKLDLTLIAGDEVNPDLHGRPSPVVVQLLELRHPVAFENADFFSLYE 63

Query: 92  KDQATLGAELVQREEVLLRPGESRKLDFNLPPDAKAIGVMAAFRDLDRARWREVRPVTTG 151
           + + TL  + V  EE+ LRPGE + L  ++ P ++ +GV+AA+RDL   +WR V PV  G
Sbjct: 64  RAEQTLSKDWVNGEELELRPGEQQALKLSVEPHSRYVGVLAAYRDLPHVQWRLVLPVAPG 123

Query: 152 KAQSLDVLLGARQMRIDA 169
           +    D++L    +R+ A
Sbjct: 124 QLTRADIVLDQTGLRMAA 141