Pairwise Alignments

Query, 370 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 831 a.a., OmpA domain protein from Pseudomonas putida KT2440

 Score = 88.6 bits (218), Expect = 6e-22
 Identities = 68/259 (26%), Positives = 108/259 (41%), Gaps = 14/259 (5%)

Query: 82  VPWFLFFGDAAANLPGLLAAGHGERMPAREADGAKADACW-----HWWLTAATVAIEVPP 136
           +PW+L  G  AA    ++    G   P  E +G +           W+ ++  V +    
Sbjct: 124 LPWYLVIGQPAAGKSTMILQS-GLNFPYAEREGVRVAGLGGTRNCDWFFSSEAVLL---- 178

Query: 137 DAVGDAAGTPAQRGLWLQSLLALAERRHRLPLNGMVACVAARDLLHADESDLAALAARMR 196
           D  G    +P + G W   L  L + R R PLNG++  V+  D+LH    D   +A R+R
Sbjct: 179 DTAGRYMNSPEEAGKWRGFLQLLRQHRQRRPLNGLIVSVSIADILHGSVEDQERVAKRLR 238

Query: 197 RLLDETSDTLRLQMPAYLVVTGLEQLPGYAVLHRALPPEALSQAVGHRLTDPSPVIATPA 256
             + E+   L +++P YLV T  + +PG+   +R L   A  + +G   +      A   
Sbjct: 239 ERIQESCALLEVRLPIYLVFTKCDLIPGFTAFYRQLDDAARGEVMGKTFSHKGYEQA-DW 297

Query: 257 AERLDAVFDPLAQHLHALRMSLLREQAGAADRL--AVHEFVEAVRALQPGLRTFAQVLFE 314
            +R     D L ++   +    L +Q     R   A + F   + AL+P L  F   L  
Sbjct: 298 GQRFSNAMDELTRYWGQMASQQLVQQDIQVTRRNDAAYRFPLELAALKPRLHQFVDSLLR 357

Query: 315 NHGKGTRAPRWRGLYLTAA 333
            +     A   RG Y TAA
Sbjct: 358 AN-PYQNAEMLRGFYFTAA 375