Pairwise Alignments

Query, 225 a.a., Two-component transcriptional response regulator, LuxR family, but with unusual receiver domain from Variovorax sp. SCN45

Subject, 216 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  123 bits (308), Expect = 3e-33
 Identities = 82/222 (36%), Positives = 124/222 (55%), Gaps = 19/222 (8%)

Query: 2   KILIADDHRLVIEAVKAKLS-ELEPGIEFVLAMSVDELLAGATD--DLDLALIDLNMPGA 58
           +ILIADDH L   A++  ++  L   +  V   S+ EL    ++  D DL L+DLNMPGA
Sbjct: 5   EILIADDHPLFRGALRQAVTLGLGSDVRLVEVASIAELETRLSEKADWDLVLLDLNMPGA 64

Query: 59  DGQAHIDVIRQRHPAVPVMVLSGYEDPAIMRSALERGVLGFIPKAYSPDVMLSAVRLVLA 118
            G + + ++R ++P +PV+++S  E+ A++  + E G  GFIPK+ + +V+  AVR VL 
Sbjct: 65  YGFSGLVLLRGQYPQIPVVMVSAQEEAAVVVKSREFGASGFIPKSSTLEVIQDAVRKVLD 124

Query: 119 GGVYVPPMMLTALPPGIVAGVVPQAAEALSSRGGSQTLEHLRNVLTERQVEVLQLLSQGK 178
           G V+ PP     +    V+     A+E L+S             LT +Q  VL ++ +G 
Sbjct: 125 GEVWWPPQAFEKVD---VSAEAKAASEGLAS-------------LTPQQFRVLTMVCEGL 168

Query: 179 PNKLIGRSLGISEGTVKIHLAAIFRALNVRNRTEAVVAAQAL 220
            NK I   L +SE T+K H+ AIFR L VR RT+A +  Q L
Sbjct: 169 LNKQIAYELSVSEATIKAHVTAIFRKLGVRTRTQAALLLQQL 210