Pairwise Alignments

Query, 203 a.a., Transcription antitermination protein NusG from Variovorax sp. SCN45

Subject, 186 a.a., transcription termination/antitermination factor NusG from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  145 bits (365), Expect = 6e-40
 Identities = 79/182 (43%), Positives = 110/182 (60%), Gaps = 7/182 (3%)

Query: 28  DLRWYVVHAYSGMEKAVERNITERINRAGMQDKFGRILVPTEEVVEIKNGQKRTTERRFF 87
           DL+WYVV A SG EK  +  +   I R  + +   ++L+P E+V E++ G+KR  ER FF
Sbjct: 3   DLKWYVVRAVSGQEKKAKAYLENEIMRHNLDEYVPQVLIPAEKVYEMRGGKKRIRERSFF 62

Query: 88  PGYVLVEM-IMDDESWHLVKHTNKVTGFVG-----GAKNRPAPISQKEVEDIVSQMQQGT 141
           PGYVLV   +   E+ H++  T  V GF+G      A  +P P+ Q EV  I+  + +  
Sbjct: 63  PGYVLVHADLSHGEAEHIIISTPGVIGFLGTEEKGAASKKPVPLRQSEVNRILGTVDEAE 122

Query: 142 EKPRH-KVEFTVGEFVRVKEGPFTDFNGTVEEVNYEKSKVSVSVMIFGRATPVELEFSQV 200
           E+       F VGE V+V +GPF+ F+GTVEEV  E+ K++V V IFGR TPVEL + QV
Sbjct: 123 EQTEVLDTPFVVGEIVKVMDGPFSGFSGTVEEVFEERKKLNVMVKIFGRNTPVELNYMQV 182

Query: 201 EK 202
           EK
Sbjct: 183 EK 184