Pairwise Alignments

Query, 203 a.a., Transcription antitermination protein NusG from Variovorax sp. SCN45

Subject, 188 a.a., transcription antitermination protein from Agrobacterium fabrum C58

 Score = 55.5 bits (132), Expect = 6e-13
 Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 21/183 (11%)

Query: 31  WYVVHAYSGMEKAVERNITERINRAGMQDKFGRILVPTEEVVE--IKNGQKRTTERRFFP 88
           W+VV      EKAVE    + + +AG+     ++ +P E + E  ++        R   P
Sbjct: 15  WFVVETKHKAEKAVE----DALRKAGV-----KVFLPLETIGETVVRGRIIPAVSRPLLP 65

Query: 89  GYVLVEMIMDDESWHLVKHTNKVTGFVGGAKNRPAPISQKEVEDIVSQMQQGTEKP-RHK 147
           GYVLV ++    +   +     V GFVGG  + P  +S +E+    +     T    +H 
Sbjct: 66  GYVLVNIVYSPAAVCGIARLEGVAGFVGGMVH-PHRVSDEEMNRFKAFGDDETAPDVKHC 124

Query: 148 VEFTVGEFVRVKEGPFTDFNGTVEEVNYEK--------SKVSVSVMIFGRATPVELEFSQ 199
            +F  G+ VR   GPF  F G + ++  ++        +   V+V +FG+ + +E   + 
Sbjct: 125 EQFKRGDKVRFVLGPFASFGGNILKLRKDRAVDGERVATGAVVAVDVFGKVSTIEAPLAL 184

Query: 200 VEK 202
           +E+
Sbjct: 185 LEQ 187