Pairwise Alignments

Query, 756 a.a., Nitrogen regulation protein NtrY (EC 2.7.3.-) from Variovorax sp. SCN45

Subject, 593 a.a., Alginate biosynthesis sensor protein KinB from Pseudomonas putida KT2440

 Score =  112 bits (280), Expect = 6e-29
 Identities = 125/500 (25%), Positives = 212/500 (42%), Gaps = 52/500 (10%)

Query: 243 DFDTAPRYLQVTRPLPPAVVANALAVQEANREYQERALAREGLRRMYIGTLTLSLFLAVF 302
           D  T  R + V +PL  A   N +     +   Q   L      R     L +S  L + 
Sbjct: 119 DSATPARSMGVDQPLGAAF--NQVRTDLIDSHKQALDLITRSEERTRDRALLVSGVLGLM 176

Query: 303 GAVLLAVLF------GNQLARPLLVLADGVRQVAAGDLRPTAVLQGKDELGGLTRSFAVM 356
           G V+L + F        +  +P+  LA    Q+  G+   T  +    EL  LTR F +M
Sbjct: 177 GLVVLVLGFITAHNIARRFGQPIEALAKAADQLGKGNFDVTLPVTQAAELNQLTRRFGLM 236

Query: 357 TQQLADARGAVEKTMGQLDAARANLQTILDNLTSGVIVLDAKGTVLSTNPGATRVLRAPL 416
              L   +      + +L A +  LQ +LD++  G++++D +G +   NP A R L    
Sbjct: 237 ADALRKHQAT---NVDELLAGQQRLQAVLDSIDDGLLIIDRQGRLEHLNPVAQRQLGWND 293

Query: 417 AAYEGQSLVDVPGLAEFGAKVQQQFDEFLVERMQHGL----DHWQHAFELHASGQDMPQQ 472
           +   G SLV+     E   +++Q      ++R    L    D          +    PQ 
Sbjct: 294 SRL-GSSLVEALQRPELEQQLRQVLRGGSLDRPPDDLNMEVDEESRLLTYSLTPVSHPQG 352

Query: 473 DGAINIVARGAELPGAARLLVFDDISEIVSAQRAQAWGEVARRLAHEIKNPLTPIQLSAE 532
                        P    ++V  D++E  + +R ++  E   R +HE++ P+T + ++  
Sbjct: 353 -------------PILGAVMVLHDVTEQRAFERVRS--EFVLRASHELRTPVTGMHMAFG 397

Query: 533 RLEMKLSGKVQPPEQAVLVKSVKTIVDQVDAMKRLVNEFRDYAR----LPAADLKPVDLN 588
            L  ++    +  E  +L    +TI +++  + +L+N+  +++R    L   +L P  ++
Sbjct: 398 LLRERVKFPPEARENDLL----ETIGEEMQRLTQLINDLLNFSRYQSGLQKLELAPCAID 453

Query: 589 ALLVDVLQLY--NAESLPIVLRSELDERCPPIRGDAQQIRQVIHNLLQNAQDAAEAAASG 646
            LL      +   A    I L  ELD   P I+ D  Q+ +V+ NLL NA          
Sbjct: 454 DLLDHAQSRFAEQAAHKQIELIKELDPPLPRIQADVAQLDRVLDNLLHNA-------IRH 506

Query: 647 TGKRGEVVIRTRLGDSGRRVRLTVQDSGPGFAENILKRAFEPYVTT--KTKGTGLGLAVV 704
           T   G + +  R      RV ++V+D+G G +     R FEP+V    K  G GLGLA+ 
Sbjct: 507 TANGGRIRLHARR--HAERVIISVEDNGEGISYGQQARIFEPFVQVGRKKGGAGLGLALC 564

Query: 705 KKIADEHGARIELSNRVVDG 724
           K+I   HG R+ + +R   G
Sbjct: 565 KEIVQLHGGRMGVFSRPGQG 584