Pairwise Alignments

Query, 763 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 1248 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  113 bits (283), Expect = 5e-29
 Identities = 78/255 (30%), Positives = 135/255 (52%), Gaps = 9/255 (3%)

Query: 422 ARKTHTLNA-ALEQAEHQAREQTRLMAYVTHDLRAPLATIIG--HVRLLRDEMPQPPDRL 478
           AR T    A A + AE  AR ++  +A ++H++R P+  IIG  H+ L  D  P+  D +
Sbjct: 699 ARATAEAQARAKDAAEDAARTKSDFLANMSHEIRTPMNAIIGMAHLALKTDLDPRQKDYV 758

Query: 479 QAIERSAAYQLSLIDDLLDYAKGELLPFSFEPRPARLQALLDDIAQYADTLAQRRNNAFE 538
           + I++S  + L +I+D+LD++K E      E     L  +L+++       A  +     
Sbjct: 759 RKIQQSGQHLLGIINDILDFSKIEAGKLEVEATEIHLDKVLENVGNLISEKATAKGLELL 818

Query: 539 LEVQGALPRAVLIDSKRFHQLLLNLLSNAAKFTHGGKIGLRVR-ARPRAESWRLQFEVWD 597
            +V   +P  ++ D+ R  Q+L+N  +NA KFT  G+I + VR          L+FEV D
Sbjct: 819 FDVGAGVPLDLMGDALRLGQVLINYANNAVKFTEAGEIVVAVRLMEDLGPDVMLRFEVRD 878

Query: 598 SGAGIDLKEQARIRQAFAENAPSAS----GNGLGLVIARRIVQRMGGRLLLMSHPNLGTR 653
           +G G+  +++AR+ Q+F++   S +    G GLGL I++++ + MGG + + S P  G+ 
Sbjct: 879 TGIGLTDEQKARLFQSFSQADTSTTRKFGGTGLGLAISKKLAELMGGSVGVDSVPGQGST 938

Query: 654 VRFSV-IVKDAPEEP 667
             F+  + K  P  P
Sbjct: 939 FWFTARLGKGKPRAP 953