Pairwise Alignments

Query, 169 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 170 a.a., RNA polymerase, sigma 19 factor from Pseudomonas putida KT2440

 Score =  151 bits (382), Expect = 5e-42
 Identities = 75/150 (50%), Positives = 107/150 (71%), Gaps = 1/150 (0%)

Query: 14  LYSDHHPWLLDMLRRKLGNLDNAADLAQDTFVRILSSNEA-GPLREPRAYLTTVASRIAA 72
           LY +H  WL   LRR++GN  +AADL+QDTF+RIL+S +    +REPRAYL TV  R+ +
Sbjct: 15  LYREHRGWLEAWLRRRMGNAWDAADLSQDTFLRILASAQPLADIREPRAYLLTVGKRLLS 74

Query: 73  QYFRRLALERTYLEAIAHLPEASAPSPETRLLVVEALAAVSRVLDGLKPHVREIFLMAQL 132
            + +R +LE+ YL+A+A LPE   PSPE R +++E L A+  +LDGLKP +R+ FL +QL
Sbjct: 75  NFHQRRSLEQAYLDALAQLPEQHVPSPEQRWVLLETLQALDELLDGLKPAIRKAFLWSQL 134

Query: 133 DGLTYSQIAQQLGVTINVVQKAMLKAYRHC 162
           +GL Y++I Q+LGV    V++ M +AY HC
Sbjct: 135 EGLGYAEIGQRLGVCQRSVKRYMAQAYEHC 164