Pairwise Alignments

Query, 169 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 172 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score =  139 bits (350), Expect = 2e-38
 Identities = 70/160 (43%), Positives = 103/160 (64%)

Query: 10  LVNTLYSDHHPWLLDMLRRKLGNLDNAADLAQDTFVRILSSNEAGPLREPRAYLTTVASR 69
           LV  LY DH  WLL  L+R +     A DL+QDTFVR+L   +    REPRA+L  VA  
Sbjct: 11  LVGALYRDHRGWLLAWLQRSMACRQRAEDLSQDTFVRLLGREQLDTPREPRAFLAAVAKG 70

Query: 70  IAAQYFRRLALERTYLEAIAHLPEASAPSPETRLLVVEALAAVSRVLDGLKPHVREIFLM 129
           +   +FRR ALE+ YL  +A +PEA  PSPE + L++E L A+ R+L  L    R  FL 
Sbjct: 71  LMFDHFRRAALEQAYLAELALIPEAEQPSPEMQHLILEDLKAIDRLLGKLSSKARAAFLH 130

Query: 130 AQLDGLTYSQIAQQLGVTINVVQKAMLKAYRHCYDAVYGD 169
           ++LDG+ +++IA++LGV+++ V++ + +  R CY A+YG+
Sbjct: 131 SRLDGMGHAEIAERLGVSVSRVRQYIAQGMRQCYVALYGE 170