Pairwise Alignments

Query, 337 a.a., Fe2+-dicitrate sensor, membrane component from Variovorax sp. SCN45

Subject, 321 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  178 bits (451), Expect = 2e-49
 Identities = 122/321 (38%), Positives = 162/321 (50%), Gaps = 12/321 (3%)

Query: 23  PIDSAVVDQAVAWLVKIQSGGASAADSAACDIWRQAHPDHERAWLRLCGLGRDLREGTQG 82
           P+D AV+  A  W  ++ +    AA  A    W      H  AW  +  + +    G  G
Sbjct: 5   PLDHAVLQAAAGWFARLHAAHNDAAIQAQWHAWLNEDTRHRLAWSYVENINQRFG-GLSG 63

Query: 83  VAPQIARSALRGA--DRQQRRWALKS--IAGL-GVGAWGAWALR--HDIAALGADHRTGV 135
            A Q AR        DR  RR  L S  +AG+ GV  WG W         A  A +RTG+
Sbjct: 64  QAEQ-ARQVFDSVRRDRHSRRAVLGSLCVAGVAGVLGWGGWQRGWVDSPRAWFATYRTGL 122

Query: 136 GERRAVVLSDGTRLVLNTRSAVDVRFDASARTLRLLGGEIMVTTGKDPARRPFIVLGRDG 195
           GE R V L+DG++L LN  +A+DV+FD  +R LRL  GEI++ +GKDP  RP  V+ R G
Sbjct: 123 GEVRPVTLADGSQLWLNGGTALDVQFDEGSRQLRLYRGEILIESGKDP--RPLSVVTRAG 180

Query: 196 RMVPVGTRFVVRAFDEAASELTVLEGEVDLSAGEQSQVTRVPAGSRVRFGPASVGALNRA 255
           R+ P+GTRF VR      + L+V  G V  +     + T + AG  + F    VGA + A
Sbjct: 181 RVQPLGTRFSVRD-QGLQTTLSVFAGAVQATCSGSGRQTTLQAGQMMVFDAQQVGAPSTA 239

Query: 256 DERAAAWTDGTLVVERMRLADFLGELGRYRGGVLRCDPEVGGLLVSGAFPLADTDAVLAM 315
                 W+ G LV E M L   +  L  YR G L  DP +G L   G FPL DTD  LAM
Sbjct: 240 QRLREDWSRGVLVAEDMPLVQMIDILRDYRHGHLGIDPAIGSLRAVGTFPLLDTDRALAM 299

Query: 316 LEETLPVRLRSMSRYWVTVAA 336
           LE  LP+R+     +WV++ A
Sbjct: 300 LERALPIRVVRTLPWWVSIEA 320