Pairwise Alignments

Query, 328 a.a., Fe2+-dicitrate sensor, membrane component from Variovorax sp. SCN45

Subject, 316 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  176 bits (445), Expect = 9e-49
 Identities = 112/328 (34%), Positives = 170/328 (51%), Gaps = 14/328 (4%)

Query: 1   MSAGTVDPRLVDEAAQWLARMHAGHFTEADARRCEQWRNQSADHQRVWRSAEQLSRKFGA 60
           M  GT     VD+A  WL ++     +    ++ + W      ++  W+    L  +   
Sbjct: 1   MPDGTPAQAQVDQAIDWLVKLRFDTPSPRTEQQFQHWLASHPHNRLAWQRVSNLGDELAG 60

Query: 61  VPPAVGMPVLDR-RRAAANRRALLRTFAVLLGAPAAAWVGYRAVPWQTLGAEYRTATGER 119
           +P  +    LD  +   A+RR  L+   +L    +  W     +    L A+  TATGER
Sbjct: 61  LPKDLSRRTLDASQHPKASRRDHLKLLGLLAVGGSLGWAAREPLGLPQLLADTSTATGER 120

Query: 120 RDIALADGSRISLNTATAIDVVFDAARRTVRQRAGEILVDTAPDPNPGGSRPFVVETSEG 179
           R    +DGSR+ LNTA+AID+ + A +R ++   GE+ +++    NP  +RPF V T  G
Sbjct: 121 RQWQGSDGSRLQLNTASAIDLHYSAEQRQLKLIHGEVSLES----NPNDNRPFHVATRVG 176

Query: 180 RLRALGTRFVVRRDAGDTSGGEGRSQLEVLAGAVEVRPARAASAPVVVPAGQRVSFTADA 239
            L     + ++R ++           L V  G V + PA +ASA  V+P G+ +  TAD 
Sbjct: 177 PLTTFDGQLLLRENSQGLL-------LSVRRGEVTLFPA-SASARQVLP-GETLQVTADG 227

Query: 240 VGTLSPVGPGAGAWARGVLYAEEMPLGELLAEIARYRSGVLRCDPAVAGLRVSGAFQLTD 299
                 +      W  GVL  ++MPL E  +E+ RYR G+LRC P VAGL+VSG +QL D
Sbjct: 228 SIQARTLHNDPWGWTEGVLSVQQMPLAEFASELGRYRPGLLRCAPEVAGLKVSGTYQLAD 287

Query: 300 TDRILSVLAQTLPVRVDARTRYWVTVSA 327
           T +IL +L ++LPVRV+ RTRYWV++ A
Sbjct: 288 TGQILQLLTRSLPVRVEYRTRYWVSIGA 315