Pairwise Alignments

Query, 328 a.a., Fe2+-dicitrate sensor, membrane component from Variovorax sp. SCN45

Subject, 318 a.a., putative transmembrane sensor from Pseudomonas putida KT2440

 Score =  164 bits (415), Expect = 3e-45
 Identities = 101/330 (30%), Positives = 165/330 (50%), Gaps = 17/330 (5%)

Query: 1   MSAGTVDPRLVDEAAQWLARMHAGHFTEADARRCEQWRNQSADHQRVWRSAEQLSRKFG- 59
           M+    D + V +A QW+ R+       A  ++C QWR+   ++++ W+    L +    
Sbjct: 1   MTVARPDTKTVRQAIQWMLRLRESGHDPALQQQCAQWRSSHHENEQAWQRMVHLHKDLDL 60

Query: 60  -AVPPA-VGMPVLDRRRAAANRRALLRTFAVLLGAPAAAWVGYRAVPWQTLGAEYRTATG 117
            A+P A + +  L+  +    RR  L+    ++ A +A+W+           ++Y T TG
Sbjct: 61  RAIPGAGLALQTLETSQQRLRRRQALKLLGGVVMAGSASWLAKDLDTVSAWTSDYATGTG 120

Query: 118 ERRDIALADGSRISLNTATAIDVVFDAARRTVRQRAGEILVDTAPDPNPGGSRPFVVETS 177
           ERR   L DGS + LNT +A+D+ F   +R VR + GE++++  P        P +VET 
Sbjct: 121 ERRVFTLPDGSLMQLNTCSAVDLAFHDQQRLVRLKLGELMINCNP------RHPLLVETR 174

Query: 178 EGRLRALGTRFVVRRDAGDTSGGEGRSQLEVLAGAVEVRPARAASAPVVVPAGQRVSFTA 237
           +  L     RFV  +D+  T       ++ V  G V +    A     +   GQ     A
Sbjct: 175 DALLEGFEGRFVAYQDSDCT-------RVSVSHGKVAIHRPGAGQLQWI-EGGQNWRLDA 226

Query: 238 DAVGTLSPVGPGAGAWARGVLYAEEMPLGELLAEIARYRSGVLRCDPAVAGLRVSGAFQL 297
                L+ +   A AW  G++  ++M L   LA+++RYR G L C   +A LR+SG F+L
Sbjct: 227 QGAHRLAHMDMDAMAWTEGLIVTQDMRLSNFLAQVSRYRHGYLGCSNEIADLRLSGVFRL 286

Query: 298 TDTDRILSVLAQTLPVRVDARTRYWVTVSA 327
            D +++L +L QTLPVR+  RTR+WV V +
Sbjct: 287 EDPEQLLRLLPQTLPVRLRRRTRWWVHVES 316