Pairwise Alignments

Query, 418 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

Subject, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

 Score = 64.3 bits (155), Expect = 6e-15
 Identities = 74/320 (23%), Positives = 124/320 (38%), Gaps = 40/320 (12%)

Query: 38  PVEPPLPGASLVVWIVAAMLAALLA----WAWFFKLDEVSTGTGKVVPSSREQMIQSLEG 93
           P   P P      W++  +L  +LA    WAW+  +      T     +     I  L  
Sbjct: 10  PSVAPEPSRKRKAWLLGLLLLLILAGVGTWAWYSIVGRWHESTDDAYVNGNVVEITPLVA 69

Query: 94  GILVDLKVREGDIVSAGQVLAQLDRTKTESTVQESASRVRAALAMSARLTAEVNGTPLVF 153
           G +  +   +GD+V AGQVL Q D   +E  +Q +     A LA S R            
Sbjct: 70  GTVTSIGADDGDLVHAGQVLLQFDPADSEVALQSA----EAKLARSVR------------ 113

Query: 154 PDEVRGEPGLVRTETALYQSRREQLASSLAGVNQALVLMRRELALTEPLVSRGAASDVEV 213
             +VRG    V +  A  ++R+ +L  +    N+  V           L   GA +  E+
Sbjct: 114 --QVRGLYSNVDSLKAQLETRQAELRKAQQDFNRRKV-----------LADSGAIAAEEL 160

Query: 214 LRLKRQINEAETKAADLRSQYYVKAR---EDLAKANAEIEAQRSVTRGRSDSLTRLTFAS 270
              +  ++ A+      R Q    +    + +  ++ ++ A  +  R       R T  +
Sbjct: 161 SHARDDLSVAQAAVNSARQQLSTSSALVDDTVVSSHPDVMAAAADLRQAYLDHARTTLVA 220

Query: 271 PVRGIVKDIVVTTVGGVLPPGGKLMEIVPLDEKLLVEARISPRDVAFIHPGQDATVKVTA 330
           PV G V    V  +G  L PG   M ++PLD+ + ++A      +  +  GQ   V++TA
Sbjct: 221 PVTGYVAKRTV-QLGQRLQPGTATMAVIPLDQ-VWIDANFKETQLREMRIGQ--PVEITA 276

Query: 331 YDYAIYGGLPGKVTTISPDT 350
             Y       G V ++   T
Sbjct: 277 DVYGSEVKYSGTVDSLGAGT 296