Pairwise Alignments

Query, 418 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

Subject, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

 Score =  466 bits (1200), Expect = e-136
 Identities = 236/373 (63%), Positives = 293/373 (78%)

Query: 46  ASLVVWIVAAMLAALLAWAWFFKLDEVSTGTGKVVPSSREQMIQSLEGGILVDLKVREGD 105
           A  ++ + A MLAA LAWA +F++ EVSTGTGKV+PSSREQ+IQS EGGI+  + V EGD
Sbjct: 22  AGRIITLCALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGD 81

Query: 106 IVSAGQVLAQLDRTKTESTVQESASRVRAALAMSARLTAEVNGTPLVFPDEVRGEPGLVR 165
           +V  GQVLAQLD TKT S+V ES ++ RAA A  ARL AEV G PL FP+ +R  P L+ 
Sbjct: 82  LVERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGKPLTFPESLRDSPDLID 141

Query: 166 TETALYQSRREQLASSLAGVNQALVLMRRELALTEPLVSRGAASDVEVLRLKRQINEAET 225
            ETALYQ+RR  L  +LAG+  +L L+R EL +TE L   GA+S VEV+RL RQ +E E 
Sbjct: 142 AETALYQTRRRGLEQTLAGIQDSLQLVRSELKITENLAKMGASSRVEVIRLNRQRSELEL 201

Query: 226 KAADLRSQYYVKAREDLAKANAEIEAQRSVTRGRSDSLTRLTFASPVRGIVKDIVVTTVG 285
           KA + RS Y V+ARE+LAKA+AE +A   V RGRSDSLTRLT  SPVRGIVKDI V T+G
Sbjct: 202 KANEARSDYLVRAREELAKASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLG 261

Query: 286 GVLPPGGKLMEIVPLDEKLLVEARISPRDVAFIHPGQDATVKVTAYDYAIYGGLPGKVTT 345
           GV+ PGG++M+IVP+DE+LL+E RI+PRD+AFIHP Q A VK++AYDY++YGGL GKV  
Sbjct: 262 GVVQPGGQVMKIVPMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVG 321

Query: 346 ISPDTIQDDVKRDVYYYRVYIRTDADHLKNRSGRSFPIVPGMIATVDIHTGSKTVLDYLI 405
           ISPDT+QD+VK ++YYYRV+IRT+ D L+N++G+ F IVPGMIATVDI TG KT+LDYLI
Sbjct: 322 ISPDTLQDEVKPEIYYYRVFIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLI 381

Query: 406 KPLNKASEALRER 418
           KPLN+A EALRER
Sbjct: 382 KPLNRAKEALRER 394