Pairwise Alignments

Query, 418 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

Subject, 458 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score =  305 bits (782), Expect = 1e-87
 Identities = 175/416 (42%), Positives = 248/416 (59%), Gaps = 48/416 (11%)

Query: 48  LVVWIVAAMLAALLAWAWFFKLDEVSTGTGKVVPSSREQMIQSLEGGILVDLKVREGDIV 107
           L +W V      L+ WA    +DEV+ G GK +PSS+ Q IQ+LEGGI+ ++  +EG IV
Sbjct: 46  LTIWGVILFFVFLIVWASVAPIDEVTRGEGKAIPSSKVQKIQNLEGGIVAEIFAKEGQIV 105

Query: 108 SAGQVLAQLDRTKTESTVQES-ASRVRAALAMSARLTAEVNGTPLVFPDEVR-GEPGLVR 165
             GQ L +LD T+  S V E+ A R+  AL +  RL+AEV   PL+  +++R   P    
Sbjct: 106 EVGQPLLRLDETRFASNVGETEADRLAMALRVE-RLSAEVEDRPLIIDEKLRKAAPNQAA 164

Query: 166 TETALYQSRREQLASSLAGVNQALV---------------------LMRRELALTEPLVS 204
           +E +LYQSRR+QL   + G+ Q LV                     L+R+E++++EPLV+
Sbjct: 165 SEESLYQSRRQQLQDEIGGLQQQLVQRQQELREYSSKRTQYANSLELLRKEISMSEPLVA 224

Query: 205 RGAASDVEVLRLKRQ---------------------INEAETKAADLRSQYYVKAREDLA 243
            GA S VEVLRL+R                      I E ++K  + R ++  +A   L 
Sbjct: 225 TGAISQVEVLRLRRAEVENRGQLDSTALAIPRAEAAIREVQSKIEETRGKFRSEALTQLN 284

Query: 244 KANAEIEAQRSVTRGRSDSLTRLTFASPVRGIVKDIVVTTVGGVLPPGGKLMEIVPLDEK 303
           +A  E+    + ++   D + R    SPVRGIVK ++V T+GGV+ PG  ++E+VPLD+ 
Sbjct: 285 EARTELNKATATSKALDDRVHRTLVTSPVRGIVKQLLVNTIGGVIQPGSDIIEVVPLDDT 344

Query: 304 LLVEARISPRDVAFIHPGQDATVKVTAYDYAIYGGLPGKVTTISPDTIQDDVKRDVYYYR 363
           L++EA+I P+D+AF+HPGQ+ATVK TAYDY IYGGL  K+  I  DTI D+ K+  YY  
Sbjct: 345 LVIEAKILPKDIAFLHPGQEATVKFTAYDYTIYGGLKAKLEQIGADTITDEDKKTTYYL- 403

Query: 364 VYIRTDADHLKNRSGRSFPIVPGMIATVDIHTGSKTVLDYLIKPLNKA-SEALRER 418
           + +RTD  HL     +   I+PGM+ATVDI TG KT++ YL+KP+ KA SEALRER
Sbjct: 404 IKLRTDRSHL-GTDEKPLLIIPGMVATVDIMTGKKTIMSYLLKPIMKARSEALRER 458