Pairwise Alignments

Query, 418 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

Subject, 443 a.a., HlyD family type I secretion periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  193 bits (490), Expect = 1e-53
 Identities = 133/420 (31%), Positives = 223/420 (53%), Gaps = 48/420 (11%)

Query: 44  PGASLVVWIVAAMLAALLAWAWFFKLDEVSTGTGKVVPSSREQMIQSLEGGILVDLKVRE 103
           P A L+V  ++  L   + WA   +L+ VS  TG++ PSS+ + +  LEGGI+ ++ V E
Sbjct: 27  PIARLMVMALSGALVVFILWASIGQLEVVSVATGEIAPSSQLKQLSHLEGGIVGEILVAE 86

Query: 104 GDIVSAGQVLAQLDRTKTESTVQESASRVRAALAMSARLTAEVNG-TPLVFP-DEVRGEP 161
           GD V AGQ L  L  TK+ + + E + R+ +      RL A  +  + + FP D ++  P
Sbjct: 87  GDQVRAGQPLLTLQATKSTADLGELSQRLLSLRFEILRLEAASDSKSEIQFPADLLKQYP 146

Query: 162 GLVRTETALYQSRREQLASSLAGVNQ---------------------ALVLMRRELALTE 200
            L +   A ++SRR +LAS L+G ++                     +L L+  ++A+++
Sbjct: 147 DLAKEADAFFRSRRARLASELSGADEQIKQRQQEINGFRSRIQNDRHSLELLNEQIAISD 206

Query: 201 PLVSRGAAS---DVEVLR----LKRQINEAET--------------KAADLRSQYYVKAR 239
            L+ +   +    +++L+    LK +INEAE+              + A + + +  ++R
Sbjct: 207 DLLKKDLQNRFVHIDLLKQASELKGRINEAESALSRSNAALAEAHAQKAKVTAAFEEESR 266

Query: 240 EDLAKANAEIEAQRSVTRGRSDSLTRLTFASPVRGIVKDIVVTTVGGVLPPGGKLMEIVP 299
             L KA  E       T   SD+L R    +PV GIVK +   T GGV+ PG  ++++VP
Sbjct: 267 TQLDKARREFSELSQRTASFSDNLDRTVINAPVGGIVKKLYFVTQGGVIRPGAPVIDLVP 326

Query: 300 LDEKLLVEARISPRDVAFIHPGQDATVKVTAYDYAIYGGLPGKVTTISPDTIQDDVKRDV 359
            D++LLVEA++ P++V ++  G  A VK+T+ D A++G L  KV  ISPDT  ++     
Sbjct: 327 SDDRLLVEAKLPPQNVGYVKVGDPAYVKLTSPDAALFGRLHAKVIHISPDTFTEEKIGTF 386

Query: 360 YYYRVYIRTDADHLKNRSGRSFPIVPGMIATVDIHTGSKTVLDYLIKP-LNKASEALRER 418
           Y  R+ +  D     +  G  + ++PG+   VDI TG+++V+ YL  P L + SE++RER
Sbjct: 387 YKVRLSVERD---FFDGGGERYQLLPGVQVAVDIVTGTRSVMRYLFGPYLRQMSESMRER 443