Pairwise Alignments

Query, 418 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

Subject, 468 a.a., HlyD family type I secretion periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  170 bits (431), Expect = 7e-47
 Identities = 114/411 (27%), Positives = 202/411 (49%), Gaps = 48/411 (11%)

Query: 52  IVAAMLAALLAWAWFFKLDEVSTGTGKVVPSSREQMIQSLEGGILVDLKVREGDIVSAGQ 111
           + +   AA + WA F  + E++T  G+++P+ + Q +Q LEGGI+ D+  R+GD+V AG 
Sbjct: 62  LASTTTAAFVVWASFTDVPEIATAEGQIIPTGQVQAVQHLEGGIVQDILARDGDLVEAGA 121

Query: 112 VLAQLDRTKTESTVQESASRVRAALAMSARLTAEVNGTPLVFPDEVRGEPGLVRTETALY 171
            + +L+  +  S ++++ +R    L  + RL A        F +  +G   L+    A++
Sbjct: 122 PIVRLNAAQAISDLEQTRAREATLLIKAERLRALAEERQPDFSNMPKGYDRLMSDNMAIF 181

Query: 172 QSRREQ---------------------LASSLAGVNQALVLMRRELALTEPLVSRGAASD 210
            S+ +                      L S    + + L  ++ E+ + + LV++G  S 
Sbjct: 182 NSQSQARDTSRSVILSQMEQKRSDLRLLESQERSLREQLGPLQEEMTMRQELVAKGLVSR 241

Query: 211 VEVLRLKRQIN---------------------EAETKAADLRSQYYVKAREDLAKANAEI 249
           V  L  KR+++                     E E +  D +S       +DL     E+
Sbjct: 242 VVFLDTKRELSRVQGELARLIGQEVTAREALSEVENRLMDNKSSLQKSTMDDLGTTINEL 301

Query: 250 -EAQRSVTRGRSDSLTRLTFASPVRGIVKDIVVTTVGGVLPPGGKLMEIVPLDEKLLVEA 308
            + Q S+ R   D + RL   +PVRG+VK + V   G V+  GG + E+VP++ ++ V+A
Sbjct: 302 AQVQESIGR-LEDRVARLEIIAPVRGLVKGLTVKNQGAVIQAGGNVCEVVPVETQMKVDA 360

Query: 309 RISPRDVAFIHPGQDATVKVTAYDYAIYGGLPGKVTTISPDTIQDDVKRDVYYYRVYIRT 368
           +I+ +DV  +  GQ   VKVT YD+A YG + G +T IS  +  D+  +   +++  I  
Sbjct: 361 KINTKDVGHLKIGQPVRVKVTTYDFARYGAVDGTLTKISASSFADE--KGNPFFKGVIDL 418

Query: 369 DADHLKNRSGRSFPIVPGMIATVDIHTGSKTVLDYLIKPL-NKASEALRER 418
             +++    GR + I PGM  T +I TG KT+L Y++KP+  +  ++  ER
Sbjct: 419 KHNYVGLTPGR-YGIQPGMSVTAEIITGDKTLLQYMLKPIFTQIQQSFHER 468